RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00025033022 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
8968 bases |
Strand |
Minus strand |
Position |
LUXX01049411.1 : 682180 - 691147 |
RNA binding domain |
ResIII , DEAD , RIG-I_C , RIG-I_C-RD |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00025019266 |
ResIII |
PF04851 |
5.5e-21 |
1 |
ENSSSCP00025019266 |
DEAD |
PF00270 |
5.1e-18 |
2 |
ENSSSCP00025019266 |
RIG-I_C |
PF18119 |
1.7e-33 |
3 |
ENSSSCP00025019266 |
RIG-I_C-RD |
PF11648 |
3.4e-35 |
4 |
ENSSSCP00025019188 |
ResIII |
PF04851 |
6.5e-21 |
1 |
ENSSSCP00025019188 |
DEAD |
PF00270 |
3.6e-18 |
2 |
ENSSSCP00025019188 |
RIG-I_C |
PF18119 |
2e-33 |
3 |
ENSSSCP00025019188 |
RIG-I_C-RD |
PF11648 |
3.7e-35 |
4 |
ENSSSCP00025019150 |
ResIII |
PF04851 |
7.1e-21 |
1 |
ENSSSCP00025019150 |
DEAD |
PF00270 |
5.1e-18 |
2 |
ENSSSCP00025019150 |
RIG-I_C |
PF18119 |
7e-34 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00025044955 |
3588 |
634aa |
ENSSSCP00025019150 |
- |
ENSSSCT00025045039 |
2737 |
681aa |
ENSSSCP00025019188 |
- |
ENSSSCT00025045201 |
2280 |
631aa |
ENSSSCP00025019266 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025036234 | 42.4242 | 28.6413 | sus_scrofa_largewhite | ENSSSCP00025019188 | 63.7298 | 43.025 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025040570 | 36.4793 | 22.6935 | sus_scrofa_largewhite | ENSSSCP00025019188 | 50.514 | 31.4244 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 92.2173 | 91.3363 | sus_scrofa_pietrain | ENSSSCP00055046532 | 96.9136 | 95.9877 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 100 | 99.8532 | sus_scrofa | ENSSSCP00000018455 | 100 | 99.8532 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 94.7137 | 92.8047 | sus_scrofa_bamei | ENSSSCP00050040665 | 94.7137 | 92.8047 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 99.8532 | 99.7063 | sus_scrofa_wuzhishan | ENSSSCP00005017970 | 99.8532 | 99.7063 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 99.8532 | 99.7063 | sus_scrofa_tibetan | ENSSSCP00015017268 | 97.2818 | 97.1388 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 99.8532 | 99.8532 | sus_scrofa_rongchang | ENSSSCP00030043157 | 99.8532 | 99.8532 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 92.0705 | 91.1894 | sus_scrofa_berkshire | ENSSSCP00065003892 | 96.7593 | 95.8333 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 99.8532 | 99.7063 | sus_scrofa_meishan | ENSSSCP00040011862 | 99.8532 | 99.7063 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 100 | 99.8532 | sus_scrofa_usmarc | ENSSSCP00070023636 | 100 | 99.8532 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 99.8532 | 99.7063 | sus_scrofa_jinhua | ENSSSCP00060007903 | 99.8532 | 99.7063 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 100 | 99.8532 | sus_scrofa_hampshire | ENSSSCP00035009842 | 100 | 99.8532 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 89.5742 | 84.5815 | ovis_aries_rambouillet | ENSOARP00020004062 | 89.7059 | 84.7059 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 86.931 | 80.1762 | bos_taurus | ENSBTAP00000053909 | 82.5662 | 76.1506 |
ENSSSCG00025033022 | sus_scrofa_largewhite | ENSSSCP00025019188 | 100 | 99.8532 | sus_scrofa_landrace | ENSSSCP00045046783 | 100 | 99.8532 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |