RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00025032361	Gene ID		Accession	-
Symbol	MRPL30	Alias	-	Full Name	NA
Status	Confidence	Length	67698 bases	Strand	Plus strand
Position	LUXX01040909.1 : 2035046 - 2102743	RNA binding domain	Ribosomal_L30
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00025018710	Ribosomal_L30	PF00327	1.3e-13	1
ENSSSCP00025018748	Ribosomal_L30	PF00327	1.3e-05	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
MRPL30-202	ENSSSCT00025043992	2815	161aa	ENSSSCP00025018710
MRPL30-201	ENSSSCT00025044080	1686	174aa	ENSSSCP00025018748

Gene Model

Click here to download ENSSSCG00025032361's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00025032361's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00025032361

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00025032361	sus_scrofa_largewhite	ENSSSCP00025018748	99.4253	99.4253	sus_scrofa_bamei	ENSSSCP00050023181	97.191	97.191
ENSSSCG00025032361	sus_scrofa_largewhite	ENSSSCP00025018748	98.8506	98.8506	sus_scrofa_wuzhishan	ENSSSCP00005000921	98.8506	98.8506
ENSSSCG00025032361	sus_scrofa_largewhite	ENSSSCP00025018748	98.8506	98.8506	sus_scrofa_tibetan	ENSSSCP00015013714	96.6292	96.6292
ENSSSCG00025032361	sus_scrofa_largewhite	ENSSSCP00025018748	99.4253	99.4253	sus_scrofa_rongchang	ENSSSCP00030006727	99.4253	99.4253
ENSSSCG00025032361	sus_scrofa_largewhite	ENSSSCP00025018748	99.4253	99.4253	sus_scrofa_berkshire	ENSSSCP00065037004	99.4253	99.4253
ENSSSCG00025032361	sus_scrofa_largewhite	ENSSSCP00025018748	98.8506	98.8506	sus_scrofa_meishan	ENSSSCP00040018662	96.6292	96.6292
ENSSSCG00025032361	sus_scrofa_largewhite	ENSSSCP00025018748	98.8506	98.8506	sus_scrofa_jinhua	ENSSSCP00060039294	96.6292	96.6292
ENSSSCG00025032361	sus_scrofa_largewhite	ENSSSCP00025018748	99.4253	99.4253	sus_scrofa_hampshire	ENSSSCP00035026838	99.4253	99.4253
ENSSSCG00025032361	sus_scrofa_largewhite	ENSSSCP00025018748	99.4253	99.4253	sus_scrofa_landrace	ENSSSCP00045024622	97.191	97.191

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression