Description

Ensembl ID ENSSSCG00025024710 Gene ID Accession -
Symbol PLOD2 Alias - Full Name NA
Status Confidence Length 111881 bases Strand Plus strand
Position LUXX01015839.1 : 1333686 - 1445566 RNA binding domain 2OG-FeII_Oxy
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00025014039 2OG-FeII_Oxy PF03171 1.2e-05 1
ENSSSCP00025014261 2OG-FeII_Oxy PF03171 1.2e-05 1
ENSSSCP00025014174 2OG-FeII_Oxy PF03171 1.3e-05 1
ENSSSCP00025013935 2OG-FeII_Oxy PF03171 1.3e-05 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
PLOD2-201 ENSSSCT00025033464 3967 760aa ENSSSCP00025013935
PLOD2-202 ENSSSCT00025033741 3925 703aa ENSSSCP00025014039
PLOD2-203 ENSSSCT00025034041 4933 739aa ENSSSCP00025014174
PLOD2-204 ENSSSCT00025034237 3392 705aa ENSSSCP00025014261

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002503233776.859559.3664sus_scrofa_largewhiteENSSSCP0002501393573.421156.7105
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002503883976.344158.4677sus_scrofa_largewhiteENSSSCP0002501393574.736857.2368
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002500940230.016115.5698sus_scrofa_largewhiteENSSSCP0002501393524.605312.7632
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002502425530.830714.6965sus_scrofa_largewhiteENSSSCP0002501393525.394712.1053
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002500870831.260516.3025sus_scrofa_largewhiteENSSSCP0002501393524.473712.7632

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP00025013935100100sus_scrofa_pietrainENSSSCP00055033519100100
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP00025013935100100sus_scrofaENSSSCP00000012459100100
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP00025013935100100sus_scrofa_bameiENSSSCP00050000992100100
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002501393598.026394.6053equus_caballusENSECAP0000000799498.28594.8549
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002501393595.131695sus_scrofa_wuzhishanENSSSCP0000502573299.586899.449
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP00025013935100100sus_scrofa_tibetanENSSSCP00015027547100100
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002501393510099.8684sus_scrofa_rongchangENSSSCP0003000628887.557687.4424
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP00025013935100100sus_scrofa_berkshireENSSSCP00065005612100100
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP00025013935100100sus_scrofa_meishanENSSSCP00040038305100100
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002501393597.236897.2368sus_scrofa_usmarcENSSSCP00070010154100100
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP00025013935100100sus_scrofa_jinhuaENSSSCP00060007510100100
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP00025013935100100sus_scrofa_hampshireENSSSCP00035022335100100
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002501393598.815896.4474ovis_aries_rambouilletENSOARP0002000695498.815896.4474
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP0002501393598.421196.0526bos_taurusENSBTAP0000003189598.162795.8005
ENSSSCG00025024710sus_scrofa_largewhiteENSSSCP00025013935100100sus_scrofa_landraceENSSSCP00045031972100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression