RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00025017789	Gene ID		Accession	-
Symbol	EIF2A	Alias	-	Full Name	NA
Status	Confidence	Length	42597 bases	Strand	Minus strand
Position	LUXX01032835.1 : 373420 - 416016	RNA binding domain	eIF2A
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00025010382	eIF2A	PF08662	5.9e-78	1
ENSSSCP00025010355	eIF2A	PF08662	7.1e-78	1
ENSSSCP00025010389	eIF2A	PF08662	7.8e-78	1
ENSSSCP00025010374	eIF2A	PF08662	8.5e-77	1
ENSSSCP00025010394	eIF2A	PF08662	8.8e-77	1
ENSSSCP00025010364	eIF2A	PF08662	1.8e-76	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
EIF2A-201	ENSSSCT00025024541	2632	585aa	ENSSSCP00025010355
EIF2A-202	ENSSSCT00025024561	2326	472aa	ENSSSCP00025010364
EIF2A-203	ENSSSCT00025024579	1982	499aa	ENSSSCP00025010374
EIF2A-204	ENSSSCT00025024595	1982	547aa	ENSSSCP00025010382
EIF2A-206	ENSSSCT00025024614	1821	590aa	ENSSSCP00025010389
EIF2A-205	ENSSSCT00025024628	1572	507aa	ENSSSCP00025010394

Gene Model

Click here to download ENSSSCG00025017789's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00025017789's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00025017789

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	100	100	sus_scrofa_pietrain	ENSSSCP00055028780	100	100
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	100	100	sus_scrofa	ENSSSCP00000073972	99.8308	99.8308
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	100	100	sus_scrofa_bamei	ENSSSCP00050019026	99.3266	99.3266
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	93.5593	89.322	equus_caballus	ENSECAP00000046661	95.1724	90.8621
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	100	100	sus_scrofa_wuzhishan	ENSSSCP00005024171	99.1597	99.1597
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	100	100	sus_scrofa_tibetan	ENSSSCP00015044253	99.3266	99.3266
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	100	100	sus_scrofa_rongchang	ENSSSCP00030021254	99.3266	99.3266
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	100	100	sus_scrofa_berkshire	ENSSSCP00065043088	100	100
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	100	100	sus_scrofa_meishan	ENSSSCP00040045111	99.1597	99.1597
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	96.1017	95.0847	sus_scrofa_usmarc	ENSSSCP00070007647	93.719	92.7273
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	100	100	sus_scrofa_jinhua	ENSSSCP00060039237	99.3266	99.3266
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	99.8305	99.661	sus_scrofa_hampshire	ENSSSCP00035006074	99.6616	99.4924
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	93.3898	90.8475	ovis_aries_rambouillet	ENSOARP00020005880	94.188	91.6239
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	93.0508	90	bos_taurus	ENSBTAP00000061378	92.1141	89.094
ENSSSCG00025017789	sus_scrofa_largewhite	ENSSSCP00025010389	100	100	sus_scrofa_landrace	ENSSSCP00045033077	99.3266	99.3266

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression