Description

Ensembl ID ENSSSCG00025012958 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 19675 bases Strand Minus strand
Position LUXX01017562.1 : 1044266 - 1063940 RNA binding domain 2OG-FeII_Oxy
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00025006913 2OG-FeII_Oxy PF03171 3.6e-09 1
ENSSSCP00025006871 2OG-FeII_Oxy PF03171 4.1e-09 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00025017188 2603 736aa ENSSSCP00025006871
- ENSSSCT00025017273 2433 685aa ENSSSCP00025006913
- ENSSSCT00025017373 2895 698aa ENSSSCP00025006953

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002501797158.321942.641sus_scrofa_largewhiteENSSSCP0002500687157.608742.1196
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500049964.305948.4419sus_scrofa_largewhiteENSSSCP0002500687161.684846.4674

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687185.597884.2391sus_scrofa_pietrainENSSSCP0005502190990.257988.8252
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687185.597884.2391sus_scrofaENSSSCP0000001998590.257988.8252
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687110099.7283sus_scrofa_bameiENSSSCP0005001297210099.7283
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687195.78892.2554equus_caballusENSECAP0000002041496.311592.7596
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687173.777270.3804sus_scrofa_wuzhishanENSSSCP0000500817577.793774.212
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687182.065279.6196sus_scrofa_tibetanENSSSCP0001504536888.823586.1765
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687110099.7283sus_scrofa_rongchangENSSSCP0003001897810099.7283
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687185.597884.2391sus_scrofa_berkshireENSSSCP0006500264590.257988.8252
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687110099.8641sus_scrofa_meishanENSSSCP0004001076810099.8641
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687190.217488.587sus_scrofa_usmarcENSSSCP0007004997486.571185.0065
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687193.885993.4783sus_scrofa_jinhuaENSSSCP0006002871092.627392.2252
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687185.597884.2391sus_scrofa_hampshireENSSSCP0003502351190.257988.8252
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687196.87594.4293ovis_aries_rambouilletENSOARP0002000034296.87594.4293
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687196.739194.2935bos_taurusENSBTAP0000002311096.739194.2935
ENSSSCG00025012958sus_scrofa_largewhiteENSSSCP0002500687110099.8641sus_scrofa_landraceENSSSCP0004500945710099.8641

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression