RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00025009800 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
52361 bases |
Strand |
Minus strand |
Position |
LUXX01030650.1 : 710872 - 763232 |
RNA binding domain |
RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00025005100 |
RNA_pol_Rpb2_1 |
PF04563 |
9.2e-68 |
1 |
ENSSSCP00025005100 |
RNA_pol_Rpb2_3 |
PF04565 |
1.5e-23 |
2 |
ENSSSCP00025005100 |
RNA_pol_Rpb2_7 |
PF04560 |
9.2e-34 |
3 |
ENSSSCP00025005100 |
RNA_pol_Rpb2_2 |
PF04561 |
9.2e-56 |
4 |
ENSSSCP00025005100 |
RNA_pol_Rpb2_6 |
PF00562 |
1e-127 |
5 |
ENSSSCP00025005100 |
RNA_pol_Rpb2_4 |
PF04566 |
3e-24 |
6 |
ENSSSCP00025005100 |
RNA_pol_Rpb2_5 |
PF04567 |
2.4e-16 |
7 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00025012988 |
5765 |
1251aa |
ENSSSCP00025005100 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025012256 | 61.165 | 39.6293 | sus_scrofa_largewhite | ENSSSCP00025005100 | 55.3957 | 35.8913 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025002136 | 44.9339 | 29.6916 | sus_scrofa_largewhite | ENSSSCP00025005100 | 40.7674 | 26.9384 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 99.9201 | 99.8401 | sus_scrofa_pietrain | ENSSSCP00055031338 | 99.9201 | 99.8401 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 99.9201 | 99.9201 | sus_scrofa | ENSSSCP00000023238 | 96.1538 | 96.1538 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 56.4349 | 56.4349 | sus_scrofa_bamei | ENSSSCP00050021208 | 100 | 100 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 91.287 | 91.287 | equus_caballus | ENSECAP00000011680 | 99.8252 | 99.8252 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 93.765 | 93.4452 | sus_scrofa_wuzhishan | ENSSSCP00005039844 | 98.4887 | 98.1528 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 99.8401 | 99.8401 | sus_scrofa_tibetan | ENSSSCP00015020828 | 99.8401 | 99.8401 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 99.8401 | 99.7602 | sus_scrofa_rongchang | ENSSSCP00030032272 | 99.8401 | 99.7602 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065004956 | 100 | 100 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 99.8401 | 99.8401 | sus_scrofa_meishan | ENSSSCP00040038769 | 99.8401 | 99.8401 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 99.9201 | 99.9201 | sus_scrofa_usmarc | ENSSSCP00070019448 | 99.9201 | 99.9201 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 99.8401 | 99.8401 | sus_scrofa_jinhua | ENSSSCP00060032747 | 99.8401 | 99.8401 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 99.9201 | 99.9201 | sus_scrofa_hampshire | ENSSSCP00035018234 | 99.9201 | 99.9201 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 93.765 | 93.765 | ovis_aries_rambouillet | ENSOARP00020025959 | 99.9148 | 99.9148 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 93.765 | 93.765 | bos_taurus | ENSBTAP00000025800 | 99.9148 | 99.9148 |
ENSSSCG00025009800 | sus_scrofa_largewhite | ENSSSCP00025005100 | 99.8401 | 99.8401 | sus_scrofa_landrace | ENSSSCP00045000801 | 99.8401 | 99.8401 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |