Description

Ensembl ID ENSSSCG00025009800 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 52361 bases Strand Minus strand
Position LUXX01030650.1 : 710872 - 763232 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00025005100 RNA_pol_Rpb2_1 PF04563 9.2e-68 1
ENSSSCP00025005100 RNA_pol_Rpb2_3 PF04565 1.5e-23 2
ENSSSCP00025005100 RNA_pol_Rpb2_7 PF04560 9.2e-34 3
ENSSSCP00025005100 RNA_pol_Rpb2_2 PF04561 9.2e-56 4
ENSSSCP00025005100 RNA_pol_Rpb2_6 PF00562 1e-127 5
ENSSSCP00025005100 RNA_pol_Rpb2_4 PF04566 3e-24 6
ENSSSCP00025005100 RNA_pol_Rpb2_5 PF04567 2.4e-16 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00025012988 5765 1251aa ENSSSCP00025005100

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002501225661.16539.6293sus_scrofa_largewhiteENSSSCP0002500510055.395735.8913
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500213644.933929.6916sus_scrofa_largewhiteENSSSCP0002500510040.767426.9384

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510099.920199.8401sus_scrofa_pietrainENSSSCP0005503133899.920199.8401
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510099.920199.9201sus_scrofaENSSSCP0000002323896.153896.1538
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510056.434956.4349sus_scrofa_bameiENSSSCP00050021208100100
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510091.28791.287equus_caballusENSECAP0000001168099.825299.8252
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510093.76593.4452sus_scrofa_wuzhishanENSSSCP0000503984498.488798.1528
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510099.840199.8401sus_scrofa_tibetanENSSSCP0001502082899.840199.8401
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510099.840199.7602sus_scrofa_rongchangENSSSCP0003003227299.840199.7602
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP00025005100100100sus_scrofa_berkshireENSSSCP00065004956100100
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510099.840199.8401sus_scrofa_meishanENSSSCP0004003876999.840199.8401
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510099.920199.9201sus_scrofa_usmarcENSSSCP0007001944899.920199.9201
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510099.840199.8401sus_scrofa_jinhuaENSSSCP0006003274799.840199.8401
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510099.920199.9201sus_scrofa_hampshireENSSSCP0003501823499.920199.9201
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510093.76593.765ovis_aries_rambouilletENSOARP0002002595999.914899.9148
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510093.76593.765bos_taurusENSBTAP0000002580099.914899.9148
ENSSSCG00025009800sus_scrofa_largewhiteENSSSCP0002500510099.840199.8401sus_scrofa_landraceENSSSCP0004500080199.840199.8401

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression