RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00015077734 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
98440 bases |
Strand |
Minus strand |
Position |
AORO02050009.1 : 380062 - 478501 |
RNA binding domain |
BDHCT , DEAD , HRDC |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00015045111 |
BDHCT |
PF08072 |
2.4e-21 |
1 |
ENSSSCP00015045111 |
DEAD |
PF00270 |
7.8e-16 |
2 |
ENSSSCP00015045111 |
HRDC |
PF00570 |
8.2e-12 |
3 |
ENSSSCP00015045030 |
BDHCT |
PF08072 |
2.6e-21 |
1 |
ENSSSCP00015045030 |
DEAD |
PF00270 |
5.2e-20 |
2 |
ENSSSCP00015045030 |
HRDC |
PF00570 |
8.5e-12 |
3 |
ENSSSCP00015045086 |
BDHCT |
PF08072 |
2.6e-21 |
1 |
ENSSSCP00015045086 |
DEAD |
PF00270 |
4.5e-20 |
2 |
ENSSSCP00015045086 |
HRDC |
PF00570 |
7.6e-12 |
3 |
ENSSSCP00015045075 |
BDHCT |
PF08072 |
2.6e-21 |
1 |
ENSSSCP00015045075 |
DEAD |
PF00270 |
4.5e-20 |
2 |
ENSSSCP00015045075 |
HRDC |
PF00570 |
7.6e-12 |
3 |
ENSSSCP00015045096 |
DEAD |
PF00270 |
5.2e-20 |
1 |
ENSSSCP00015045096 |
HRDC |
PF00570 |
8.2e-12 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00015106876 |
7366 |
1432aa |
ENSSSCP00015045030 |
- |
ENSSSCT00015106936 |
4990 |
1310aa |
ENSSSCP00015045075 |
- |
ENSSSCT00015106947 |
5116 |
1316aa |
ENSSSCP00015045086 |
- |
ENSSSCT00015106966 |
4185 |
1394aa |
ENSSSCP00015045096 |
- |
ENSSSCT00015106986 |
4287 |
1369aa |
ENSSSCP00015045111 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015001584 | 31.9422 | 16.9342 | sus_scrofa_tibetan | ENSSSCP00015045030 | 27.7933 | 14.7346 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015021114 | 55.47 | 35.131 | sus_scrofa_tibetan | ENSSSCP00015045030 | 25.1397 | 15.9218 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015023055 | 36.5854 | 24.2886 | sus_scrofa_tibetan | ENSSSCP00015045030 | 25.1397 | 16.6899 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 90.433 | 85.4749 | equus_caballus | ENSECAP00000068873 | 89.1873 | 84.2975 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 99.9302 | 99.8603 | sus_scrofa | ENSSSCP00000001986 | 99.9302 | 99.8603 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 95.5307 | 95.5307 | sus_scrofa_meishan | ENSSSCP00040001557 | 99.927 | 99.927 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 95.4609 | 95.3911 | sus_scrofa_berkshire | ENSSSCP00065023741 | 99.8539 | 99.7809 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 95.5307 | 95.4609 | sus_scrofa_pietrain | ENSSSCP00055024511 | 99.927 | 99.8539 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 83.5196 | 78.6313 | bos_taurus | ENSBTAP00000027057 | 90.8125 | 85.4973 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 95.5307 | 95.4609 | sus_scrofa_jinhua | ENSSSCP00060027404 | 99.927 | 99.8539 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 95.5307 | 95.5307 | sus_scrofa_bamei | ENSSSCP00050037895 | 99.927 | 99.927 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 90.5726 | 84.9162 | ovis_aries_rambouillet | ENSOARP00020022294 | 90.7628 | 85.0945 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 95.8101 | 95.8101 | sus_scrofa_largewhite | ENSSSCP00025036768 | 99.7093 | 99.7093 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 95.8101 | 95.8101 | sus_scrofa_hampshire | ENSSSCP00035027742 | 99.7093 | 99.7093 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 99.4413 | 99.4413 | sus_scrofa_usmarc | ENSSSCP00070028120 | 99.7199 | 99.7199 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 99.9302 | 99.9302 | sus_scrofa_wuzhishan | ENSSSCP00005008326 | 99.9302 | 99.9302 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 95.5307 | 95.4609 | sus_scrofa_rongchang | ENSSSCP00030043714 | 99.927 | 99.8539 |
ENSSSCG00015077734 | sus_scrofa_tibetan | ENSSSCP00015045030 | 99.4413 | 99.3715 | sus_scrofa_landrace | ENSSSCP00045038501 | 99.7199 | 99.6499 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |