Description

Ensembl ID ENSSSCG00015077734 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 98440 bases Strand Minus strand
Position AORO02050009.1 : 380062 - 478501 RNA binding domain BDHCT , DEAD , HRDC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00015045111 BDHCT PF08072 2.4e-21 1
ENSSSCP00015045111 DEAD PF00270 7.8e-16 2
ENSSSCP00015045111 HRDC PF00570 8.2e-12 3
ENSSSCP00015045030 BDHCT PF08072 2.6e-21 1
ENSSSCP00015045030 DEAD PF00270 5.2e-20 2
ENSSSCP00015045030 HRDC PF00570 8.5e-12 3
ENSSSCP00015045086 BDHCT PF08072 2.6e-21 1
ENSSSCP00015045086 DEAD PF00270 4.5e-20 2
ENSSSCP00015045086 HRDC PF00570 7.6e-12 3
ENSSSCP00015045075 BDHCT PF08072 2.6e-21 1
ENSSSCP00015045075 DEAD PF00270 4.5e-20 2
ENSSSCP00015045075 HRDC PF00570 7.6e-12 3
ENSSSCP00015045096 DEAD PF00270 5.2e-20 1
ENSSSCP00015045096 HRDC PF00570 8.2e-12 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00015106876 7366 1432aa ENSSSCP00015045030
- ENSSSCT00015106936 4990 1310aa ENSSSCP00015045075
- ENSSSCT00015106947 5116 1316aa ENSSSCP00015045086
- ENSSSCT00015106966 4185 1394aa ENSSSCP00015045096
- ENSSSCT00015106986 4287 1369aa ENSSSCP00015045111

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001500158431.942216.9342sus_scrofa_tibetanENSSSCP0001504503027.793314.7346
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001502111455.4735.131sus_scrofa_tibetanENSSSCP0001504503025.139715.9218
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001502305536.585424.2886sus_scrofa_tibetanENSSSCP0001504503025.139716.6899

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503090.43385.4749equus_caballusENSECAP0000006887389.187384.2975
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503099.930299.8603sus_scrofaENSSSCP0000000198699.930299.8603
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503095.530795.5307sus_scrofa_meishanENSSSCP0004000155799.92799.927
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503095.460995.3911sus_scrofa_berkshireENSSSCP0006502374199.853999.7809
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503095.530795.4609sus_scrofa_pietrainENSSSCP0005502451199.92799.8539
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503083.519678.6313bos_taurusENSBTAP0000002705790.812585.4973
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503095.530795.4609sus_scrofa_jinhuaENSSSCP0006002740499.92799.8539
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503095.530795.5307sus_scrofa_bameiENSSSCP0005003789599.92799.927
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503090.572684.9162ovis_aries_rambouilletENSOARP0002002229490.762885.0945
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503095.810195.8101sus_scrofa_largewhiteENSSSCP0002503676899.709399.7093
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503095.810195.8101sus_scrofa_hampshireENSSSCP0003502774299.709399.7093
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503099.441399.4413sus_scrofa_usmarcENSSSCP0007002812099.719999.7199
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503099.930299.9302sus_scrofa_wuzhishanENSSSCP0000500832699.930299.9302
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503095.530795.4609sus_scrofa_rongchangENSSSCP0003004371499.92799.8539
ENSSSCG00015077734sus_scrofa_tibetanENSSSCP0001504503099.441399.3715sus_scrofa_landraceENSSSCP0004503850199.719999.6499

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression