| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00015075162 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
110139 bases |
Strand |
Minus strand |
| Position |
AORO02070827.1 : 77426 - 187564 |
RNA binding domain |
TNRC6-PABC_bdg , Ago_hook |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00015042551 |
TNRC6-PABC_bdg |
PF16608 |
2.6e-124 |
1 |
| ENSSSCP00015042551 |
Ago_hook |
PF10427 |
6.5e-22 |
2 |
| ENSSSCP00015042639 |
TNRC6-PABC_bdg |
PF16608 |
2.7e-124 |
1 |
| ENSSSCP00015042639 |
Ago_hook |
PF10427 |
2.3e-20 |
2 |
| ENSSSCP00015042267 |
TNRC6-PABC_bdg |
PF16608 |
2.7e-124 |
1 |
| ENSSSCP00015042267 |
Ago_hook |
PF10427 |
7.8e-22 |
2 |
| ENSSSCP00015042116 |
TNRC6-PABC_bdg |
PF16608 |
2.9e-124 |
1 |
| ENSSSCP00015042116 |
Ago_hook |
PF10427 |
8.8e-20 |
2 |
| ENSSSCP00015041988 |
TNRC6-PABC_bdg |
PF16608 |
2.9e-124 |
1 |
| ENSSSCP00015041988 |
Ago_hook |
PF10427 |
4.1e-22 |
2 |
| ENSSSCP00015041908 |
TNRC6-PABC_bdg |
PF16608 |
3.1e-124 |
1 |
| ENSSSCP00015041908 |
Ago_hook |
PF10427 |
9.2e-22 |
2 |
| ENSSSCP00015042445 |
TNRC6-PABC_bdg |
PF16608 |
5.5e-98 |
1 |
| ENSSSCP00015042445 |
TNRC6-PABC_bdg |
PF16608 |
5.5e-98 |
2 |
| ENSSSCP00015042445 |
Ago_hook |
PF10427 |
8.4e-22 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00015101187 |
7008 |
1964aa |
ENSSSCP00015041908 |
| - |
ENSSSCT00015101377 |
7041 |
1888aa |
ENSSSCP00015041988 |
| - |
ENSSSCT00015101650 |
7008 |
1877aa |
ENSSSCP00015042116 |
| - |
ENSSSCT00015101996 |
6636 |
1819aa |
ENSSSCP00015042267 |
| - |
ENSSSCT00015102314 |
6573 |
1847aa |
ENSSSCP00015042445 |
| - |
ENSSSCT00015102461 |
6623 |
1774aa |
ENSSSCP00015042551 |
| - |
ENSSSCT00015102605 |
7294 |
1808aa |
ENSSSCP00015042639 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015020751 | 54.7038 | 42.9733 | sus_scrofa_tibetan | ENSSSCP00015041908 | 47.9633 | 37.6782 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015044246 | 31.6574 | 13.9665 | sus_scrofa_tibetan | ENSSSCP00015041908 | 8.6558 | 3.81874 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015035259 | 52.2946 | 38.6339 | sus_scrofa_tibetan | ENSSSCP00015041908 | 49.8982 | 36.8635 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015040532 | 34.0426 | 16.1094 | sus_scrofa_tibetan | ENSSSCP00015041908 | 5.70265 | 2.69857 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015008716 | 31.9312 | 15.2964 | sus_scrofa_tibetan | ENSSSCP00015041908 | 8.50305 | 4.07332 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 95.5703 | 94.7556 | equus_caballus | ENSECAP00000023421 | 96.2071 | 95.387 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4542 | sus_scrofa | ENSSSCP00000057591 | 97.4542 | 97.4542 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4542 | sus_scrofa_meishan | ENSSSCP00040038531 | 99.9478 | 99.9478 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4542 | sus_scrofa_berkshire | ENSSSCP00065021883 | 99.9478 | 99.9478 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4542 | sus_scrofa_pietrain | ENSSSCP00055014677 | 99.9478 | 99.9478 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 92.5662 | 91.3442 | bos_taurus | ENSBTAP00000055965 | 94.8852 | 93.6326 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4542 | sus_scrofa_jinhua | ENSSSCP00060014278 | 99.9478 | 99.9478 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4542 | sus_scrofa_bamei | ENSSSCP00050047997 | 99.9478 | 99.9478 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 95.2139 | 94.0937 | ovis_aries_rambouillet | ENSOARP00020032919 | 95.8974 | 94.7692 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4033 | sus_scrofa_largewhite | ENSSSCP00025024557 | 97.4542 | 97.4033 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4033 | sus_scrofa_hampshire | ENSSSCP00035026673 | 99.9478 | 99.8956 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4033 | sus_scrofa_usmarc | ENSSSCP00070033174 | 97.4542 | 97.4033 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 95.0102 | 95.0102 | sus_scrofa_wuzhishan | ENSSSCP00005011282 | 97.4413 | 97.4413 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4542 | sus_scrofa_rongchang | ENSSSCP00030041857 | 99.9478 | 99.9478 |
| ENSSSCG00015075162 | sus_scrofa_tibetan | ENSSSCP00015041908 | 97.4542 | 97.4542 | sus_scrofa_landrace | ENSSSCP00045046758 | 99.9478 | 99.9478 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
