Description

Ensembl ID ENSSSCG00015075095 Gene ID Accession -
Symbol Alias - Full Name Sus scrofa Ski2 like RNA helicase (SKIV2L), mRNA.
Status Confidence Length 11525 bases Strand Minus strand
Position AORO02070463.1 : 241587 - 253111 RNA binding domain DEAD , rRNA_proc-arch
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00015042112 DEAD PF00270 2.3e-16 1
ENSSSCP00015042112 rRNA_proc-arch PF13234 2.7e-45 2
ENSSSCP00015042057 DEAD PF00270 2.4e-16 1
ENSSSCP00015042057 rRNA_proc-arch PF13234 2.9e-45 2
ENSSSCP00015041992 DEAD PF00270 2.4e-16 1
ENSSSCP00015041992 rRNA_proc-arch PF13234 2.7e-45 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00015101383 3889 1248aa ENSSSCP00015041992
- ENSSSCT00015101509 3883 1246aa ENSSSCP00015042057
- ENSSSCT00015101635 3736 1197aa ENSSSCP00015042112

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001500431216.43217.85293sus_scrofa_tibetanENSSSCP0001504199229.006413.8622
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001503366817.97759.17603sus_scrofa_tibetanENSSSCP0001504199230.769215.7051
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001501907221.772311.7958sus_scrofa_tibetanENSSSCP0001504199229.727616.1058
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001500959854.536836.9627sus_scrofa_tibetanENSSSCP0001504199245.753231.0096
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001500775529.36814.8699sus_scrofa_tibetanENSSSCP0001504199225.320512.8205
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001502764025.678513.222sus_scrofa_tibetanENSSSCP0001504199229.567315.2244
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001501558011.95975.62316sus_scrofa_tibetanENSSSCP0001504199222.836510.7372

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199294.631492.7885equus_caballusENSECAP0000001983297.68495.7816
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199298.958398.7179sus_scrofaENSSSCP0000000152499.117298.8764
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199299.919999.9199sus_scrofa_meishanENSSSCP0004003428299.919999.9199
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199299.839799.8397sus_scrofa_berkshireENSSSCP0006501366399.839799.8397
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199299.839799.8397sus_scrofa_pietrainENSSSCP0005503617799.839799.8397
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199297.115495.0321bos_taurusENSBTAP0000000733997.271395.1846
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199299.919999.9199sus_scrofa_jinhuaENSSSCP0006004618399.919999.9199
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP00015041992100100sus_scrofa_bameiENSSSCP00050011159100100
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199299.759699.7596sus_scrofa_largewhiteENSSSCP0002503941099.759699.7596
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199299.919999.9199sus_scrofa_hampshireENSSSCP0003503571399.919999.9199
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199299.839799.8397sus_scrofa_usmarcENSSSCP0007003887099.839799.8397
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199299.919999.9199sus_scrofa_wuzhishanENSSSCP0000504414799.839999.8399
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199299.919999.9199sus_scrofa_rongchangENSSSCP0003003318799.919999.9199
ENSSSCG00015075095sus_scrofa_tibetanENSSSCP0001504199299.839799.8397sus_scrofa_landraceENSSSCP0004504804599.839799.8397

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression