RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00015075095 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
Sus scrofa Ski2 like RNA helicase (SKIV2L), mRNA. |
Status |
Confidence |
Length |
11525 bases |
Strand |
Minus strand |
Position |
AORO02070463.1 : 241587 - 253111 |
RNA binding domain |
DEAD , rRNA_proc-arch |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00015042112 |
DEAD |
PF00270 |
2.3e-16 |
1 |
ENSSSCP00015042112 |
rRNA_proc-arch |
PF13234 |
2.7e-45 |
2 |
ENSSSCP00015042057 |
DEAD |
PF00270 |
2.4e-16 |
1 |
ENSSSCP00015042057 |
rRNA_proc-arch |
PF13234 |
2.9e-45 |
2 |
ENSSSCP00015041992 |
DEAD |
PF00270 |
2.4e-16 |
1 |
ENSSSCP00015041992 |
rRNA_proc-arch |
PF13234 |
2.7e-45 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00015101383 |
3889 |
1248aa |
ENSSSCP00015041992 |
- |
ENSSSCT00015101509 |
3883 |
1246aa |
ENSSSCP00015042057 |
- |
ENSSSCT00015101635 |
3736 |
1197aa |
ENSSSCP00015042112 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015004312 | 16.4321 | 7.85293 | sus_scrofa_tibetan | ENSSSCP00015041992 | 29.0064 | 13.8622 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015033668 | 17.9775 | 9.17603 | sus_scrofa_tibetan | ENSSSCP00015041992 | 30.7692 | 15.7051 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015019072 | 21.7723 | 11.7958 | sus_scrofa_tibetan | ENSSSCP00015041992 | 29.7276 | 16.1058 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015009598 | 54.5368 | 36.9627 | sus_scrofa_tibetan | ENSSSCP00015041992 | 45.7532 | 31.0096 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015007755 | 29.368 | 14.8699 | sus_scrofa_tibetan | ENSSSCP00015041992 | 25.3205 | 12.8205 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015027640 | 25.6785 | 13.222 | sus_scrofa_tibetan | ENSSSCP00015041992 | 29.5673 | 15.2244 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015015580 | 11.9597 | 5.62316 | sus_scrofa_tibetan | ENSSSCP00015041992 | 22.8365 | 10.7372 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 94.6314 | 92.7885 | equus_caballus | ENSECAP00000019832 | 97.684 | 95.7816 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 98.9583 | 98.7179 | sus_scrofa | ENSSSCP00000001524 | 99.1172 | 98.8764 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.9199 | 99.9199 | sus_scrofa_meishan | ENSSSCP00040034282 | 99.9199 | 99.9199 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.8397 | 99.8397 | sus_scrofa_berkshire | ENSSSCP00065013663 | 99.8397 | 99.8397 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.8397 | 99.8397 | sus_scrofa_pietrain | ENSSSCP00055036177 | 99.8397 | 99.8397 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 97.1154 | 95.0321 | bos_taurus | ENSBTAP00000007339 | 97.2713 | 95.1846 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.9199 | 99.9199 | sus_scrofa_jinhua | ENSSSCP00060046183 | 99.9199 | 99.9199 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050011159 | 100 | 100 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.7596 | 99.7596 | sus_scrofa_largewhite | ENSSSCP00025039410 | 99.7596 | 99.7596 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.9199 | 99.9199 | sus_scrofa_hampshire | ENSSSCP00035035713 | 99.9199 | 99.9199 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.8397 | 99.8397 | sus_scrofa_usmarc | ENSSSCP00070038870 | 99.8397 | 99.8397 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.9199 | 99.9199 | sus_scrofa_wuzhishan | ENSSSCP00005044147 | 99.8399 | 99.8399 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.9199 | 99.9199 | sus_scrofa_rongchang | ENSSSCP00030033187 | 99.9199 | 99.9199 |
ENSSSCG00015075095 | sus_scrofa_tibetan | ENSSSCP00015041992 | 99.8397 | 99.8397 | sus_scrofa_landrace | ENSSSCP00045048045 | 99.8397 | 99.8397 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |