RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00015068969 | Gene ID |
|
Accession |
- |
Symbol |
FXR1 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
60279 bases |
Strand |
Minus strand |
Position |
AORO02056691.1 : 56576 - 116854 |
RNA binding domain |
Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00015040056 |
Agenet |
PF05641 |
1e-14 |
1 |
ENSSSCP00015040056 |
Agenet |
PF05641 |
1e-14 |
2 |
ENSSSCP00015040056 |
FXR_C1 |
PF16096 |
1.1e-38 |
3 |
ENSSSCP00015040056 |
KH_1 |
PF00013 |
7.5e-17 |
4 |
ENSSSCP00015040056 |
KH_1 |
PF00013 |
7.5e-17 |
5 |
ENSSSCP00015040056 |
KH_9 |
PF17904 |
1.4e-36 |
6 |
ENSSSCP00015040056 |
FXMRP1_C_core |
PF12235 |
7.3e-34 |
7 |
ENSSSCP00015040056 |
FXMRP1_C_core |
PF12235 |
7.3e-34 |
8 |
ENSSSCP00015038838 |
Agenet |
PF05641 |
1e-14 |
1 |
ENSSSCP00015038838 |
Agenet |
PF05641 |
1e-14 |
2 |
ENSSSCP00015038838 |
FXR_C1 |
PF16096 |
5.1e-39 |
3 |
ENSSSCP00015038838 |
KH_1 |
PF00013 |
7.1e-17 |
4 |
ENSSSCP00015038838 |
KH_1 |
PF00013 |
7.1e-17 |
5 |
ENSSSCP00015038838 |
KH_9 |
PF17904 |
1.4e-36 |
6 |
ENSSSCP00015038838 |
FXMRP1_C_core |
PF12235 |
1.9e-54 |
7 |
ENSSSCP00015039574 |
Agenet |
PF05641 |
1.2e-14 |
1 |
ENSSSCP00015039574 |
Agenet |
PF05641 |
1.2e-14 |
2 |
ENSSSCP00015039574 |
FXR_C1 |
PF16096 |
4.7e-39 |
3 |
ENSSSCP00015039574 |
KH_1 |
PF00013 |
6.8e-17 |
4 |
ENSSSCP00015039574 |
KH_1 |
PF00013 |
6.8e-17 |
5 |
ENSSSCP00015039574 |
KH_9 |
PF17904 |
3.8e-16 |
6 |
ENSSSCP00015039574 |
FXMRP1_C_core |
PF12235 |
9.3e-33 |
7 |
ENSSSCP00015039574 |
FXMRP1_C_core |
PF12235 |
9.3e-33 |
8 |
ENSSSCP00015040026 |
Agenet |
PF05641 |
1.2e-14 |
1 |
ENSSSCP00015040026 |
Agenet |
PF05641 |
1.2e-14 |
2 |
ENSSSCP00015040026 |
FXR_C1 |
PF16096 |
1.2e-38 |
3 |
ENSSSCP00015040026 |
KH_1 |
PF00013 |
8.5e-17 |
4 |
ENSSSCP00015040026 |
KH_1 |
PF00013 |
8.5e-17 |
5 |
ENSSSCP00015040026 |
KH_9 |
PF17904 |
1.5e-36 |
6 |
ENSSSCP00015040026 |
FXMRP1_C_core |
PF12235 |
2.1e-54 |
7 |
ENSSSCP00015039423 |
Agenet |
PF05641 |
1.7e-14 |
1 |
ENSSSCP00015039423 |
FXR_C1 |
PF16096 |
1.4e-38 |
2 |
ENSSSCP00015039423 |
KH_1 |
PF00013 |
1e-16 |
3 |
ENSSSCP00015039423 |
KH_1 |
PF00013 |
1e-16 |
4 |
ENSSSCP00015039423 |
KH_9 |
PF17904 |
1.6e-36 |
5 |
ENSSSCP00015039423 |
FXMRP1_C_core |
PF12235 |
2.2e-54 |
6 |
ENSSSCP00015040190 |
Agenet |
PF05641 |
2.6e-08 |
1 |
ENSSSCP00015040190 |
FXR_C1 |
PF16096 |
1.1e-38 |
2 |
ENSSSCP00015040190 |
KH_1 |
PF00013 |
7.7e-17 |
3 |
ENSSSCP00015040190 |
KH_1 |
PF00013 |
7.7e-17 |
4 |
ENSSSCP00015040190 |
KH_9 |
PF17904 |
1.4e-36 |
5 |
ENSSSCP00015040190 |
FXMRP1_C_core |
PF12235 |
1.9e-54 |
6 |
ENSSSCP00015039318 |
Agenet |
PF05641 |
3e-08 |
1 |
ENSSSCP00015039318 |
FXR_C1 |
PF16096 |
1.3e-38 |
2 |
ENSSSCP00015039318 |
KH_1 |
PF00013 |
9.3e-17 |
3 |
ENSSSCP00015039318 |
KH_1 |
PF00013 |
9.3e-17 |
4 |
ENSSSCP00015039318 |
KH_9 |
PF17904 |
1.5e-36 |
5 |
ENSSSCP00015039318 |
FXMRP1_C_core |
PF12235 |
2.2e-54 |
6 |
ENSSSCP00015039085 |
Agenet |
PF05641 |
7.1e-06 |
1 |
ENSSSCP00015039085 |
FXR_C1 |
PF16096 |
4.1e-39 |
2 |
ENSSSCP00015039085 |
KH_1 |
PF00013 |
4.9e-17 |
3 |
ENSSSCP00015039085 |
KH_1 |
PF00013 |
4.9e-17 |
4 |
ENSSSCP00015039085 |
KH_9 |
PF17904 |
1.1e-36 |
5 |
ENSSSCP00015039085 |
FXMRP1_C_core |
PF12235 |
4.8e-34 |
6 |
ENSSSCP00015039085 |
FXMRP1_C_core |
PF12235 |
4.8e-34 |
7 |
ENSSSCP00015040389 |
Agenet |
PF05641 |
8.9e-06 |
1 |
ENSSSCP00015040389 |
FXR_C1 |
PF16096 |
4.3e-39 |
2 |
ENSSSCP00015040389 |
KH_1 |
PF00013 |
5.4e-17 |
3 |
ENSSSCP00015040389 |
KH_1 |
PF00013 |
5.4e-17 |
4 |
ENSSSCP00015040389 |
KH_9 |
PF17904 |
1.1e-36 |
5 |
ENSSSCP00015040389 |
FXMRP1_C_core |
PF12235 |
6.2e-34 |
6 |
ENSSSCP00015040389 |
FXMRP1_C_core |
PF12235 |
6.2e-34 |
7 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
FXR1-203 |
ENSSSCT00015094702 |
3124 |
568aa |
ENSSSCP00015038838 |
FXR1-202 |
ENSSSCT00015095200 |
2866 |
490aa |
ENSSSCP00015039085 |
FXR1-201 |
ENSSSCT00015095739 |
3180 |
646aa |
ENSSSCP00015039318 |
FXR1-204 |
ENSSSCT00015095965 |
3011 |
677aa |
ENSSSCP00015039423 |
FXR1-208 |
ENSSSCT00015096297 |
2672 |
582aa |
ENSSSCP00015039574 |
FXR1-206 |
ENSSSCT00015097368 |
6602 |
604aa |
ENSSSCP00015040026 |
FXR1-207 |
ENSSSCT00015097453 |
6515 |
575aa |
ENSSSCP00015040056 |
FXR1-205 |
ENSSSCT00015097777 |
6498 |
573aa |
ENSSSCP00015040190 |
FXR1-209 |
ENSSSCT00015098198 |
3093 |
504aa |
ENSSSCP00015040389 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015019878 | 76.9896 | 65.0519 | sus_scrofa_tibetan | ENSSSCP00015039423 | 65.7312 | 55.5391 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015017480 | 69.3944 | 59.2471 | sus_scrofa_tibetan | ENSSSCP00015039423 | 62.6292 | 53.4712 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 99.5569 | 99.4092 | equus_caballus | ENSECAP00000023539 | 96.5616 | 96.4183 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa | ENSSSCP00000023407 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_meishan | ENSSSCP00040017268 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_berkshire | ENSSSCP00065040113 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055003371 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 95.421 | 95.2733 | bos_taurus | ENSBTAP00000068817 | 99.6914 | 99.537 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_jinhua | ENSSSCP00060012232 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050013264 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 90.2511 | 88.9217 | ovis_aries_rambouillet | ENSOARP00020007735 | 94 | 92.6154 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_largewhite | ENSSSCP00025034378 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_hampshire | ENSSSCP00035026896 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070035232 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_wuzhishan | ENSSSCP00005006524 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_rongchang | ENSSSCP00030002313 | 100 | 100 |
ENSSSCG00015068969 | sus_scrofa_tibetan | ENSSSCP00015039423 | 100 | 100 | sus_scrofa_landrace | ENSSSCP00045016997 | 100 | 100 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |