| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00015064762 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
255091 bases |
Strand |
Minus strand |
| Position |
AORO02066874.1 : 835825 - 1090915 |
RNA binding domain |
TNRC6-PABC_bdg , Ago_hook |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00015035981 |
TNRC6-PABC_bdg |
PF16608 |
1.1e-104 |
1 |
| ENSSSCP00015035981 |
Ago_hook |
PF10427 |
2.9e-18 |
2 |
| ENSSSCP00015035583 |
TNRC6-PABC_bdg |
PF16608 |
1.1e-104 |
1 |
| ENSSSCP00015035583 |
Ago_hook |
PF10427 |
2.3e-18 |
2 |
| ENSSSCP00015035392 |
TNRC6-PABC_bdg |
PF16608 |
1.1e-104 |
1 |
| ENSSSCP00015035392 |
Ago_hook |
PF10427 |
6.7e-18 |
2 |
| ENSSSCP00015035790 |
TNRC6-PABC_bdg |
PF16608 |
1.1e-104 |
1 |
| ENSSSCP00015035790 |
Ago_hook |
PF10427 |
2.2e-18 |
2 |
| ENSSSCP00015035259 |
TNRC6-PABC_bdg |
PF16608 |
1.2e-104 |
1 |
| ENSSSCP00015035259 |
Ago_hook |
PF10427 |
2.2e-18 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00015086644 |
6549 |
1874aa |
ENSSSCP00015035259 |
| - |
ENSSSCT00015086909 |
6252 |
1775aa |
ENSSSCP00015035392 |
| - |
ENSSSCT00015087365 |
6569 |
1769aa |
ENSSSCP00015035583 |
| - |
ENSSSCT00015087792 |
6303 |
1838aa |
ENSSSCP00015035790 |
| - |
ENSSSCT00015088258 |
5760 |
1755aa |
ENSSSCP00015035981 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015041908 | 49.8982 | 36.8635 | sus_scrofa_tibetan | ENSSSCP00015035259 | 52.2946 | 38.6339 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015020751 | 48.7224 | 36.2369 | sus_scrofa_tibetan | ENSSSCP00015035259 | 44.7705 | 33.2978 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015044246 | 30.9125 | 13.594 | sus_scrofa_tibetan | ENSSSCP00015035259 | 8.85806 | 3.89541 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015040532 | 32.5228 | 13.9818 | sus_scrofa_tibetan | ENSSSCP00015035259 | 5.70971 | 2.45464 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015008716 | 30.2103 | 15.2964 | sus_scrofa_tibetan | ENSSSCP00015035259 | 8.43116 | 4.26894 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 95.3042 | 94.9306 | equus_caballus | ENSECAP00000008008 | 95.2533 | 94.88 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 97.6521 | 97.5987 | sus_scrofa | ENSSSCP00000032960 | 99.8908 | 99.8362 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 94.5037 | 94.4504 | sus_scrofa_meishan | ENSSSCP00040012073 | 96.6703 | 96.6157 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 99.6798 | 99.6798 | sus_scrofa_berkshire | ENSSSCP00065006608 | 97.039 | 97.039 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 96.5848 | 96.5848 | sus_scrofa_pietrain | ENSSSCP00055048778 | 97.5741 | 97.5741 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 95.9979 | 94.7172 | bos_taurus | ENSBTAP00000028072 | 98.0381 | 96.7302 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 96.6382 | 96.6382 | sus_scrofa_jinhua | ENSSSCP00060029759 | 97.628 | 97.628 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 99.6798 | 99.6798 | sus_scrofa_bamei | ENSSSCP00050033515 | 100 | 100 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 92.3159 | 91.3554 | ovis_aries_rambouillet | ENSOARP00020030480 | 97.9615 | 96.9422 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 96.5848 | 96.5848 | sus_scrofa_largewhite | ENSSSCP00025015824 | 97.5741 | 97.5741 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 99.6265 | 99.6265 | sus_scrofa_hampshire | ENSSSCP00035046856 | 96.987 | 96.987 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 99.6265 | 99.6265 | sus_scrofa_usmarc | ENSSSCP00070047815 | 99.9465 | 99.9465 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 99.6265 | 99.6265 | sus_scrofa_wuzhishan | ENSSSCP00005005672 | 96.987 | 96.987 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 96.5848 | 96.5848 | sus_scrofa_rongchang | ENSSSCP00030003122 | 97.5741 | 97.5741 |
| ENSSSCG00015064762 | sus_scrofa_tibetan | ENSSSCP00015035259 | 96.5848 | 96.5848 | sus_scrofa_landrace | ENSSSCP00045032740 | 97.5741 | 97.5741 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
