RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00015059767	Gene ID		Accession	-
Symbol	KXD1	Alias	-	Full Name	NA
Status	Confidence	Length	11623 bases	Strand	Minus strand
Position	AORO02068340.1 : 210957 - 222579	RNA binding domain	Ribosomal_L40e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00015032307	Ribosomal_L40e	PF01020	4e-32	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
KXD1-201	ENSSSCT00015079782	3583	224aa	ENSSSCP00015032227
KXD1-202	ENSSSCT00015079963	1065	305aa	ENSSSCP00015032307
KXD1-204	ENSSSCT00015079998	1119	257aa	ENSSSCP00015032327
KXD1-203	ENSSSCT00015080104	1862	305aa	ENSSSCP00015032381
KXD1-205	ENSSSCT00015080210	885	183aa	ENSSSCP00015032421

Gene Model

Click here to download ENSSSCG00015059767's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00015059767's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00015059767

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	54.4262	49.8361	equus_caballus	ENSECAP00000066073	68.3128	62.5514
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	84.2623	83.9344	sus_scrofa	ENSSSCP00000071799	100	99.6109
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	100	99.6721	sus_scrofa_meishan	ENSSSCP00040034536	100	99.6721
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	100	99.6721	sus_scrofa_berkshire	ENSSSCP00065012474	100	99.6721
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	100	99.6721	sus_scrofa_pietrain	ENSSSCP00055034499	100	99.6721
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	60.3279	58.3607	bos_taurus	ENSBTAP00000062097	90.1961	87.2549
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	56.3934	54.7541	bos_taurus	ENSBTAP00000071466	97.7273	94.8864
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	100	99.6721	sus_scrofa_jinhua	ENSSSCP00060022235	100	99.6721
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	100	100	sus_scrofa_bamei	ENSSSCP00050045346	100	100
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	56.3934	55.7377	ovis_aries_rambouillet	ENSOARP00020005480	97.7273	96.5909
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	100	99.6721	sus_scrofa_largewhite	ENSSSCP00025020866	100	99.6721
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	100	99.6721	sus_scrofa_hampshire	ENSSSCP00035032179	100	99.6721
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	72.459	69.5082	sus_scrofa_usmarc	ENSSSCP00070024397	79.2115	75.9857
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	100	99.6721	sus_scrofa_wuzhishan	ENSSSCP00005030440	100	99.6721
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	100	100	sus_scrofa_rongchang	ENSSSCP00030038142	100	100
ENSSSCG00015059767	sus_scrofa_tibetan	ENSSSCP00015032381	100	99.6721	sus_scrofa_landrace	ENSSSCP00045031752	100	99.6721

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression