Description

Ensembl ID ENSSSCG00015051416 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 3638 bases Strand Minus strand
Position AORO02055285.1 : 72603 - 76240 RNA binding domain GTP_EFTU , GTP_EFTU_D3 , GTP_EFTU_D2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00015027395 GTP_EFTU PF00009 1.2e-52 1
ENSSSCP00015027395 GTP_EFTU_D3 PF03143 5.4e-28 2
ENSSSCP00015027395 GTP_EFTU_D2 PF03144 1.7e-14 3
ENSSSCP00015027465 GTP_EFTU PF00009 1e-31 1
ENSSSCP00015027465 GTP_EFTU_D3 PF03143 3.4e-28 2
ENSSSCP00015027465 GTP_EFTU_D2 PF03144 1e-14 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00015068432 1892 566aa ENSSSCP00015027395
- ENSSSCT00015068570 1812 442aa ENSSSCP00015027465

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502757031.796519.7138sus_scrofa_tibetanENSSSCP0001502739535.335721.9081
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001501912838.138123.4234sus_scrofa_tibetanENSSSCP0001502739522.438213.7809
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001503040934.745820.9746sus_scrofa_tibetanENSSSCP0001502739528.975317.4912
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001503437415.12358.02469sus_scrofa_tibetanENSSSCP0001502739525.971713.7809
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001501843412.2546.61896sus_scrofa_tibetanENSSSCP0001502739524.204913.0742
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001501326612.8987.59184sus_scrofa_tibetanENSSSCP0001502739527.915216.4311
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001503059530.75818.2216sus_scrofa_tibetanENSSSCP0001502739537.279222.0848
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001501853117.01638.50816sus_scrofa_tibetanENSSSCP0001502739525.795112.8975
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502055523.733713.8929sus_scrofa_tibetanENSSSCP0001502739528.975316.9611
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001501262943.506528.1385sus_scrofa_tibetanENSSSCP0001502739535.512422.9682
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001503192321.524714.0508sus_scrofa_tibetanENSSSCP0001502739525.441716.6078
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001503981319.016812.8072sus_scrofa_tibetanENSSSCP0001502739525.971717.4912
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001503286442.025926.7241sus_scrofa_tibetanENSSSCP0001502739534.452321.9081
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001503136839.330524.6862sus_scrofa_tibetanENSSSCP0001502739533.215520.8481
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001504100224.61315.0155sus_scrofa_tibetanENSSSCP0001502739528.091917.1378
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502858834.236519.9507sus_scrofa_tibetanENSSSCP0001502739524.558314.311
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001500992826.079716.113sus_scrofa_tibetanENSSSCP0001502739527.738517.1378
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP000150248993018.125sus_scrofa_tibetanENSSSCP0001502739533.922320.4947
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502197921.61813.13sus_scrofa_tibetanENSSSCP0001502739528.798617.4912

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739578.268677.3852equus_caballusENSECAP0000001734097.149196.0526
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739510099.8233sus_scrofaENSSSCP0000000833210099.8233
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739594.169692.7562sus_scrofa_meishanENSSSCP0004003290492.695791.3043
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP00015027395100100sus_scrofa_berkshireENSSSCP00065023733100100
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP00015027395100100sus_scrofa_pietrainENSSSCP00055035278100100
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739578.798678.0919bos_taurusENSBTAP0000002558698.672697.7876
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739594.169692.7562sus_scrofa_jinhuaENSSSCP0006000395292.695791.3043
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739599.823399.6466sus_scrofa_bameiENSSSCP0005003831499.823399.6466
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739579.151978.6219ovis_aries_rambouilletENSOARP0002003390598.461597.8022
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739599.823399.8233sus_scrofa_largewhiteENSSSCP0002504287299.823399.8233
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739599.823399.6466sus_scrofa_hampshireENSSSCP0003503677999.823399.6466
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739594.169692.7562sus_scrofa_usmarcENSSSCP0007002692892.695791.3043
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739577.031877.0318sus_scrofa_wuzhishanENSSSCP0000504591999.771299.7712
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP0001502739599.823399.8233sus_scrofa_rongchangENSSSCP0003004853799.823399.8233
ENSSSCG00015051416sus_scrofa_tibetanENSSSCP00015027395100100sus_scrofa_landraceENSSSCP00045045111100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression