| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00015047182 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
2650 bases |
Strand |
Plus strand |
| Position |
AORO02050002.1 : 26696 - 29345 |
RNA binding domain |
zf-met , RNA_pol_Rpb1_R |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00015025231 |
zf-met |
PF12874 |
4.3e-09 |
1 |
| ENSSSCP00015025231 |
RNA_pol_Rpb1_R |
PF05001 |
1.6e-06 |
2 |
| ENSSSCP00015025231 |
RNA_pol_Rpb1_R |
PF05001 |
1.6e-06 |
3 |
| ENSSSCP00015025231 |
RNA_pol_Rpb1_R |
PF05001 |
1.6e-06 |
4 |
| ENSSSCP00015025231 |
RNA_pol_Rpb1_R |
PF05001 |
1.6e-06 |
5 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00015062908 |
2359 |
561aa |
ENSSSCP00015025231 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015012265 | 9.90324 | 6.26067 | sus_scrofa_tibetan | ENSSSCP00015025231 | 31.016 | 19.6078 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015044312 | 39.6694 | 30.7851 | sus_scrofa_tibetan | ENSSSCP00015025231 | 34.2246 | 26.5597 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015009859 | 12.0963 | 8.04598 | sus_scrofa_tibetan | ENSSSCP00015025231 | 39.3939 | 26.2032 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015026078 | 14.2715 | 7.98403 | sus_scrofa_tibetan | ENSSSCP00015025231 | 25.4902 | 14.2602 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015031306 | 18.9763 | 12.1099 | sus_scrofa_tibetan | ENSSSCP00015025231 | 27.0945 | 17.2906 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015041221 | 44.3992 | 31.1609 | sus_scrofa_tibetan | ENSSSCP00015025231 | 38.8592 | 27.2727 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015016603 | 38.2199 | 26.7016 | sus_scrofa_tibetan | ENSSSCP00015025231 | 39.0374 | 27.2727 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015029213 | 12.9032 | 9.67742 | sus_scrofa_tibetan | ENSSSCP00015025231 | 1.42602 | 1.06952 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015005222 | 10.1833 | 6.31365 | sus_scrofa_tibetan | ENSSSCP00015025231 | 26.738 | 16.5775 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015027357 | 9.04998 | 5.6281 | sus_scrofa_tibetan | ENSSSCP00015025231 | 35.8289 | 22.2816 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015038100 | 29.2467 | 19.4978 | sus_scrofa_tibetan | ENSSSCP00015025231 | 35.2941 | 23.5294 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015000103 | 34.1216 | 23.6486 | sus_scrofa_tibetan | ENSSSCP00015025231 | 18.0036 | 12.4777 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015014510 | 33.6177 | 23.2082 | sus_scrofa_tibetan | ENSSSCP00015025231 | 35.1159 | 24.2424 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015002388 | 13.9742 | 9.04685 | sus_scrofa_tibetan | ENSSSCP00015025231 | 30.8378 | 19.9643 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015041242 | 21.1221 | 12.5413 | sus_scrofa_tibetan | ENSSSCP00015025231 | 34.2246 | 20.3209 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015029540 | 25.0689 | 16.9421 | sus_scrofa_tibetan | ENSSSCP00015025231 | 32.4421 | 21.9251 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015023180 | 35.468 | 25.78 | sus_scrofa_tibetan | ENSSSCP00015025231 | 38.5027 | 27.9857 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015028046 | 31.9559 | 23.5537 | sus_scrofa_tibetan | ENSSSCP00015025231 | 41.3547 | 30.4813 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015027645 | 44.6764 | 34.238 | sus_scrofa_tibetan | ENSSSCP00015025231 | 38.1462 | 29.2335 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015000989 | 44.6927 | 31.8436 | sus_scrofa_tibetan | ENSSSCP00015025231 | 42.7808 | 30.4813 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015015286 | 27.0718 | 18.9227 | sus_scrofa_tibetan | ENSSSCP00015025231 | 34.9376 | 24.4207 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015014405 | 24.3373 | 18.3133 | sus_scrofa_tibetan | ENSSSCP00015025231 | 36.0071 | 27.0945 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015006613 | 25.6956 | 15.8756 | sus_scrofa_tibetan | ENSSSCP00015025231 | 27.9857 | 17.2906 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015005432 | 20.4027 | 12.8859 | sus_scrofa_tibetan | ENSSSCP00015025231 | 27.0945 | 17.1123 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015002807 | 39.0826 | 28.2569 | sus_scrofa_tibetan | ENSSSCP00015025231 | 37.9679 | 27.451 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015028085 | 12.3538 | 7.38304 | sus_scrofa_tibetan | ENSSSCP00015025231 | 30.1248 | 18.0036 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015044690 | 14.4778 | 8.78165 | sus_scrofa_tibetan | ENSSSCP00015025231 | 32.6203 | 19.7861 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015012971 | 32.4786 | 24.1026 | sus_scrofa_tibetan | ENSSSCP00015025231 | 33.8681 | 25.1337 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015013249 | 26.491 | 15.6727 | sus_scrofa_tibetan | ENSSSCP00015025231 | 34.0463 | 20.1426 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 89.6613 | 87.7005 | equus_caballus | ENSECAP00000085845 | 88.0911 | 86.1646 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 99.8217 | 99.8217 | sus_scrofa | ENSSSCP00000027812 | 99.8217 | 99.8217 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 97.3262 | 96.0784 | sus_scrofa_meishan | ENSSSCP00040017377 | 85.9843 | 84.8819 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 99.8217 | 99.8217 | sus_scrofa_berkshire | ENSSSCP00065008315 | 99.8217 | 99.8217 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 99.8217 | 99.8217 | sus_scrofa_pietrain | ENSSSCP00055040883 | 99.8217 | 99.8217 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 94.2959 | 92.5134 | bos_taurus | ENSBTAP00000055880 | 95.66 | 93.8517 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 97.6827 | 96.0784 | bos_taurus | ENSBTAP00000053794 | 97.6827 | 96.0784 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 97.3262 | 96.0784 | sus_scrofa_jinhua | ENSSSCP00060047783 | 85.9843 | 84.8819 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 97.3262 | 96.0784 | sus_scrofa_bamei | ENSSSCP00050045281 | 85.9843 | 84.8819 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 98.0392 | 96.4349 | ovis_aries_rambouillet | ENSOARP00020027555 | 98.0392 | 96.4349 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 97.3262 | 96.0784 | sus_scrofa_largewhite | ENSSSCP00025032172 | 85.9843 | 84.8819 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 99.8217 | 99.8217 | sus_scrofa_hampshire | ENSSSCP00035039589 | 99.8217 | 99.8217 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 99.6435 | 99.6435 | sus_scrofa_usmarc | ENSSSCP00070017842 | 99.8214 | 99.8214 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 85.7398 | 85.3832 | sus_scrofa_wuzhishan | ENSSSCP00005024852 | 94.1292 | 93.7378 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 99.8217 | 99.8217 | sus_scrofa_rongchang | ENSSSCP00030042963 | 99.8217 | 99.8217 |
| ENSSSCG00015047182 | sus_scrofa_tibetan | ENSSSCP00015025231 | 99.8217 | 99.8217 | sus_scrofa_landrace | ENSSSCP00045027578 | 99.8217 | 99.8217 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
