Description

Ensembl ID ENSSSCG00015046187 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 36315 bases Strand Plus strand
Position AORO02056480.1 : 78044 - 114358 RNA binding domain GTP_EFTU , GTP_EFTU_D3 , GTP_EFTU_D2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00015025101 GTP_EFTU PF00009 1.5e-45 1
ENSSSCP00015025101 GTP_EFTU_D3 PF03143 5.9e-20 2
ENSSSCP00015025101 GTP_EFTU_D2 PF03144 1.6e-07 3
ENSSSCP00015025017 GTP_EFTU PF00009 1.8e-45 1
ENSSSCP00015025017 GTP_EFTU_D3 PF03143 2.3e-24 2
ENSSSCP00015025017 GTP_EFTU_D2 PF03144 2.3e-07 3
ENSSSCP00015024899 GTP_EFTU PF00009 1.8e-45 1
ENSSSCP00015024899 GTP_EFTU_D3 PF03143 1.9e-24 2
ENSSSCP00015024899 GTP_EFTU_D2 PF03144 2.4e-07 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00015062032 6680 640aa ENSSSCP00015024899
- ENSSSCT00015062340 6421 640aa ENSSSCP00015025017
- ENSSSCT00015062553 1752 583aa ENSSSCP00015025101

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502757087.122484.5787sus_scrofa_tibetanENSSSCP0001502489985.62583.125
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502739533.922320.4947sus_scrofa_tibetanENSSSCP000150248993018.125
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001501912833.333315.9159sus_scrofa_tibetanENSSSCP0001502489917.34388.28125
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001503040930.932214.8305sus_scrofa_tibetanENSSSCP0001502489922.812510.9375
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001503437416.46098.53909sus_scrofa_tibetanENSSSCP000150248992512.9688
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001501843413.8645.72451sus_scrofa_tibetanENSSSCP0001502489924.218810
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP00015013266169.30612sus_scrofa_tibetanENSSSCP0001502489930.62517.8125
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001503059546.064129.8834sus_scrofa_tibetanENSSSCP0001502489949.37532.0312
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001501853117.59918.39161sus_scrofa_tibetanENSSSCP0001502489923.593811.25
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502055527.351715.3401sus_scrofa_tibetanENSSSCP0001502489929.531216.5625
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001501262955.627736.7965sus_scrofa_tibetanENSSSCP0001502489940.156226.5625
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001503192321.225711.9581sus_scrofa_tibetanENSSSCP0001502489922.187512.5
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001503981316.17088.53816sus_scrofa_tibetanENSSSCP0001502489919.531210.3125
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001503286455.603434.9138sus_scrofa_tibetanENSSSCP0001502489940.312525.3125
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001503136852.928934.1004sus_scrofa_tibetanENSSSCP0001502489939.531225.4688
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001504100224.303412.6935sus_scrofa_tibetanENSSSCP0001502489924.531212.8125
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502858847.290629.5567sus_scrofa_tibetanENSSSCP000150248993018.75
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001500992831.395317.7741sus_scrofa_tibetanENSSSCP0001502489929.531216.7188
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502197922.546411.5385sus_scrofa_tibetanENSSSCP0001502489926.562513.5938

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489977.187576.875equus_caballusENSECAP0000001905798.99898.5972
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofaENSSSCP0000002568093.593893.5938
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofa_meishanENSSSCP0004000789693.593893.5938
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofa_berkshireENSSSCP0006504532593.593893.5938
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofa_pietrainENSSSCP0005502236993.593893.5938
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489991.87591.7188bos_taurusENSBTAP0000000465692.452892.2956
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofa_jinhuaENSSSCP0006001037793.593893.5938
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofa_bameiENSSSCP0005004730293.593893.5938
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489992.031291.7188ovis_aries_rambouilletENSOARP0002002329392.175391.8623
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofa_largewhiteENSSSCP0002501155393.593893.5938
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofa_hampshireENSSSCP0003502535293.593893.5938
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofa_usmarcENSSSCP0007004353893.593893.5938
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489987.656287.6562sus_scrofa_wuzhishanENSSSCP0000502555587.93187.931
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofa_rongchangENSSSCP0003002130293.593893.5938
ENSSSCG00015046187sus_scrofa_tibetanENSSSCP0001502489993.593893.5938sus_scrofa_landraceENSSSCP0004501112193.593893.5938

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression