Description

Ensembl ID ENSSSCG00015038620 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 90783 bases Strand Minus strand
Position AORO02008983.1 : 74281 - 165063 RNA binding domain TNRC6-PABC_bdg , Ago_hook
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00015020751 TNRC6-PABC_bdg PF16608 1.2e-119 1
ENSSSCP00015020751 Ago_hook PF10427 8.4e-20 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00015051996 7228 1722aa ENSSSCP00015020751

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001504190847.963337.6782sus_scrofa_tibetanENSSSCP0001502075154.703842.9733
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001504424631.284914.5251sus_scrofa_tibetanENSSSCP000150207519.75614.52962
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001503525944.770533.2978sus_scrofa_tibetanENSSSCP0001502075148.722436.2369
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001504053238.297919.7568sus_scrofa_tibetanENSSSCP000150207517.317073.77468
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001500871628.489516.0612sus_scrofa_tibetanENSSSCP000150207518.652734.87805

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075190.3685.5981equus_caballusENSECAP0000004591979.428375.2425
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075199.883999.8839sus_scrofaENSSSCP0000003834599.883999.8839
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP00015020751100100sus_scrofa_meishanENSSSCP0004000142988.534788.5347
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075199.941999.9419sus_scrofa_berkshireENSSSCP0006500211287.895887.8958
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075199.941999.9419sus_scrofa_pietrainENSSSCP0005501091399.941999.9419
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075192.508788.1533bos_taurusENSBTAP0000005323482.496178.6121
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075199.883999.8839sus_scrofa_jinhuaENSSSCP0006003058299.883999.8839
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075199.941999.9419sus_scrofa_bameiENSSSCP0005003008287.895887.8958
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075191.986187.3403ovis_aries_rambouilletENSOARP0002002274181.691677.5658
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075196.283496.2834sus_scrofa_largewhiteENSSSCP0002503122799.759399.7593
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075199.941999.9419sus_scrofa_hampshireENSSSCP0003502281899.941999.9419
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075198.432198.4321sus_scrofa_usmarcENSSSCP0007003227089.398789.3987
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075194.657494.6574sus_scrofa_wuzhishanENSSSCP0000500105884.281384.2813
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075199.941999.8258sus_scrofa_rongchangENSSSCP0003000554887.895887.7937
ENSSSCG00015038620sus_scrofa_tibetanENSSSCP0001502075199.825899.8258sus_scrofa_landraceENSSSCP0004504068099.825899.8258

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression