| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00015021824 | Gene ID |
|
Accession |
- |
| Symbol |
EEF1A1 |
Alias |
- |
Full Name |
Sus scrofa eukaryotic translation elongation factor 1 alpha 1 (EEF1A1), mRNA. |
| Status |
Confidence |
Length |
3985 bases |
Strand |
Minus strand |
| Position |
AORO02014246.1 : 80182 - 84166 |
RNA binding domain |
GTP_EFTU , GTP_EFTU_D3 , GTP_EFTU_D2 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00015012879 |
GTP_EFTU |
PF00009 |
8.4e-54 |
1 |
| ENSSSCP00015012879 |
GTP_EFTU_D3 |
PF03143 |
6.6e-21 |
2 |
| ENSSSCP00015012879 |
GTP_EFTU_D2 |
PF03144 |
7e-15 |
3 |
| ENSSSCP00015012629 |
GTP_EFTU |
PF00009 |
9.1e-54 |
1 |
| ENSSSCP00015012629 |
GTP_EFTU_D3 |
PF03143 |
2.4e-31 |
2 |
| ENSSSCP00015012629 |
GTP_EFTU_D2 |
PF03144 |
7.8e-15 |
3 |
| ENSSSCP00015012693 |
GTP_EFTU |
PF00009 |
9.1e-54 |
1 |
| ENSSSCP00015012693 |
GTP_EFTU_D3 |
PF03143 |
2.4e-31 |
2 |
| ENSSSCP00015012693 |
GTP_EFTU_D2 |
PF03144 |
7.8e-15 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| EEF1A1-202 |
ENSSSCT00015031860 |
1866 |
462aa |
ENSSSCP00015012629 |
| EEF1A1-201 |
ENSSSCT00015031995 |
1787 |
462aa |
ENSSSCP00015012693 |
| EEF1A1-203 |
ENSSSCT00015032429 |
1329 |
442aa |
ENSSSCP00015012879 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015027570 | 40.8585 | 26.5501 | sus_scrofa_tibetan | ENSSSCP00015012629 | 55.6277 | 36.1472 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015027395 | 35.5124 | 22.9682 | sus_scrofa_tibetan | ENSSSCP00015012629 | 43.5065 | 28.1385 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015019128 | 33.9339 | 18.9189 | sus_scrofa_tibetan | ENSSSCP00015012629 | 24.4589 | 13.6364 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015030409 | 31.5678 | 18.4322 | sus_scrofa_tibetan | ENSSSCP00015012629 | 32.2511 | 18.8312 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015034374 | 15.0206 | 8.23045 | sus_scrofa_tibetan | ENSSSCP00015012629 | 31.6017 | 17.316 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015018434 | 14.2218 | 7.24508 | sus_scrofa_tibetan | ENSSSCP00015012629 | 34.4156 | 17.5325 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015013266 | 12.4082 | 7.67347 | sus_scrofa_tibetan | ENSSSCP00015012629 | 32.9004 | 20.3463 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015030595 | 37.7551 | 25.2187 | sus_scrofa_tibetan | ENSSSCP00015012629 | 56.0606 | 37.4459 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015018531 | 18.8811 | 11.0723 | sus_scrofa_tibetan | ENSSSCP00015012629 | 35.0649 | 20.5628 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015020555 | 26.3386 | 15.1954 | sus_scrofa_tibetan | ENSSSCP00015012629 | 39.3939 | 22.7273 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015031923 | 22.87 | 14.0508 | sus_scrofa_tibetan | ENSSSCP00015012629 | 33.1169 | 20.3463 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015039813 | 17.8525 | 10.8668 | sus_scrofa_tibetan | ENSSSCP00015012629 | 29.8701 | 18.1818 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015032864 | 91.1638 | 84.0517 | sus_scrofa_tibetan | ENSSSCP00015012629 | 91.5584 | 84.4156 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015031368 | 86.4017 | 80.9623 | sus_scrofa_tibetan | ENSSSCP00015012629 | 89.3939 | 83.7662 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015041002 | 25.387 | 14.5511 | sus_scrofa_tibetan | ENSSSCP00015012629 | 35.4978 | 20.3463 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015028588 | 82.7586 | 78.8177 | sus_scrofa_tibetan | ENSSSCP00015012629 | 72.7273 | 69.2641 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015009928 | 29.0698 | 16.2791 | sus_scrofa_tibetan | ENSSSCP00015012629 | 37.8788 | 21.2121 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015024899 | 40.1562 | 26.5625 | sus_scrofa_tibetan | ENSSSCP00015012629 | 55.6277 | 36.7965 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015021979 | 18.7003 | 10.3448 | sus_scrofa_tibetan | ENSSSCP00015012629 | 30.5195 | 16.8831 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 93.5065 | 92.6407 | equus_caballus | ENSECAP00000089732 | 98.8558 | 97.9405 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 93.9394 | 93.0736 | equus_caballus | ENSECAP00000000791 | 93.5345 | 92.6724 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 99.5671 | 99.5671 | equus_caballus | ENSECAP00000076067 | 99.5671 | 99.5671 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 99.3506 | 99.3506 | equus_caballus | ENSECAP00000018148 | 100 | 100 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 96.3203 | 95.4545 | sus_scrofa | ENSSSCP00000035282 | 88.8224 | 88.0239 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 97.4026 | 96.5368 | sus_scrofa_meishan | ENSSSCP00040039346 | 90.9091 | 90.101 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 96.3203 | 95.2381 | sus_scrofa_berkshire | ENSSSCP00065025853 | 88.6454 | 87.6494 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 95.8874 | 94.5887 | sus_scrofa_pietrain | ENSSSCP00055018811 | 88.247 | 87.0518 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 14.2857 | 12.7706 | bos_taurus | ENSBTAP00000073267 | 86.8421 | 77.6316 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 13.4199 | 11.9048 | bos_taurus | ENSBTAP00000071921 | 83.7838 | 74.3243 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 13.6364 | 12.1212 | bos_taurus | ENSBTAP00000056656 | 85.1351 | 75.6757 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 93.9394 | 93.29 | bos_taurus | ENSBTAP00000045490 | 98.6364 | 97.9545 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 100 | 100 | bos_taurus | ENSBTAP00000061151 | 100 | 100 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 96.3203 | 95.2381 | sus_scrofa_jinhua | ENSSSCP00060015816 | 88.6454 | 87.6494 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 97.4026 | 96.3203 | sus_scrofa_bamei | ENSSSCP00050005711 | 90.9091 | 89.899 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 94.5887 | 94.5887 | ovis_aries_rambouillet | ENSOARP00020009810 | 100 | 100 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 93.5065 | 92.6407 | ovis_aries_rambouillet | ENSOARP00020029993 | 85.5446 | 84.7525 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 92.6407 | 91.5584 | ovis_aries_rambouillet | ENSOARP00020031507 | 97.9405 | 96.7963 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 89.6104 | 87.6623 | ovis_aries_rambouillet | ENSOARP00020027688 | 98.5714 | 96.4286 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 100 | 100 | ovis_aries_rambouillet | ENSOARP00020026234 | 100 | 100 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 90.9091 | 90.0433 | ovis_aries_rambouillet | ENSOARP00020026740 | 97.4478 | 96.5197 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 13.4199 | 12.1212 | ovis_aries_rambouillet | ENSOARP00020026659 | 84.9315 | 76.7123 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 96.3203 | 95.2381 | sus_scrofa_largewhite | ENSSSCP00025015572 | 88.6454 | 87.6494 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 96.3203 | 95.2381 | sus_scrofa_hampshire | ENSSSCP00035026737 | 88.6454 | 87.6494 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 96.3203 | 95.2381 | sus_scrofa_usmarc | ENSSSCP00070021612 | 88.6454 | 87.6494 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 97.4026 | 96.5368 | sus_scrofa_wuzhishan | ENSSSCP00005006890 | 89.1089 | 88.3168 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 97.4026 | 96.3203 | sus_scrofa_rongchang | ENSSSCP00030039988 | 90.9091 | 89.899 |
| ENSSSCG00015021824 | sus_scrofa_tibetan | ENSSSCP00015012629 | 96.1039 | 95.0216 | sus_scrofa_landrace | ENSSSCP00045036437 | 88.4462 | 87.4502 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
