RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSSCG00015020635	Gene ID	492277	Accession	-
Symbol	QKI	Alias	-	Full Name	QKI, KH domain containing RNA binding
Status	Confidence	Length	148539 bases	Strand	Minus strand
Position	AORO02018800.1 : 187285 - 335823	RNA binding domain	KH_1 , STAR_dimer
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00015010806	KH_1	PF00013	8.4e-06	1
ENSSSCP00015010806	STAR_dimer	PF16544	6.2e-27	2
ENSSSCP00015010864	KH_1	PF00013	2e-05	1
ENSSSCP00015010864	STAR_dimer	PF16544	5.7e-27	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
QKI-201	ENSSSCT00015027593	6864	316aa	ENSSSCP00015010806
QKI-202	ENSSSCT00015027741	6500	338aa	ENSSSCP00015010864

Gene Model

Click here to download ENSSSCG00015020635's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00015020635's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015039119	32.9571	23.9278	sus_scrofa_tibetan	ENSSSCP00015010864	43.1953	31.3609
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015006516	32.6599	21.8855	sus_scrofa_tibetan	ENSSSCP00015010864	28.6982	19.2308
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015027877	45.5556	27.7778	sus_scrofa_tibetan	ENSSSCP00015010864	12.1302	7.39645
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015035170	20.8861	12.6582	sus_scrofa_tibetan	ENSSSCP00015010864	39.0533	23.6686
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015022191	40.407	25.2907	sus_scrofa_tibetan	ENSSSCP00015010864	41.1243	25.7396

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	93.787	93.787	equus_caballus	ENSECAP00000035602	100	100
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	92.3077	92.3077	sus_scrofa	ENSSSCP00000054388	96.2963	96.2963
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	95.858	95.858	sus_scrofa_meishan	ENSSSCP00040010349	96.1424	96.1424
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	100	100	sus_scrofa_berkshire	ENSSSCP00065042561	100	100
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	96.1538	96.1538	sus_scrofa_pietrain	ENSSSCP00055000627	96.4392	96.4392
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	93.4911	92.8994	bos_taurus	ENSBTAP00000048511	92.6686	92.0821
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	96.1538	96.1538	sus_scrofa_jinhua	ENSSSCP00060001179	96.4392	96.4392
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	100	100	sus_scrofa_bamei	ENSSSCP00050000957	100	100
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	93.4911	92.8994	ovis_aries_rambouillet	ENSOARP00020034070	92.6686	92.0821
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	100	100	sus_scrofa_largewhite	ENSSSCP00025019620	100	100
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	66.8639	65.9763	sus_scrofa_hampshire	ENSSSCP00035007879	88.9764	87.7953
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	93.4911	92.8994	sus_scrofa_usmarc	ENSSSCP00070045981	92.6686	92.0821
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	88.7574	86.0947	sus_scrofa_wuzhishan	ENSSSCP00005025759	86.9565	84.3478
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	96.1538	96.1538	sus_scrofa_rongchang	ENSSSCP00030018911	96.4392	96.4392
ENSSSCG00015020635	sus_scrofa_tibetan	ENSSSCP00015010864	100	100	sus_scrofa_landrace	ENSSSCP00045017441	100	100

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression