RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00015009802 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
20351 bases |
Strand |
Plus strand |
Position |
AORO02013936.1 : 1175681 - 1196031 |
RNA binding domain |
SpoU_sub_bind , SpoU_methylase |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00015004971 |
SpoU_sub_bind |
PF08032 |
6.7e-14 |
1 |
ENSSSCP00015004971 |
SpoU_methylase |
PF00588 |
8.8e-28 |
2 |
ENSSSCP00015004979 |
SpoU_sub_bind |
PF08032 |
7.3e-14 |
1 |
ENSSSCP00015004979 |
SpoU_methylase |
PF00588 |
1.4e-26 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00015012858 |
6395 |
361aa |
ENSSSCP00015004971 |
- |
ENSSSCT00015012891 |
2653 |
365aa |
ENSSSCP00015004979 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015021747 | 9.39119 | 5.89378 | sus_scrofa_tibetan | ENSSSCP00015004979 | 39.726 | 24.9315 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015029859 | 30.0948 | 15.1659 | sus_scrofa_tibetan | ENSSSCP00015004979 | 34.7945 | 17.5342 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 78.9041 | 72.6027 | equus_caballus | ENSECAP00000022712 | 81.1268 | 74.6479 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 100 | 99.726 | sus_scrofa | ENSSSCP00000018745 | 100 | 99.726 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 100 | 99.726 | sus_scrofa_meishan | ENSSSCP00040046475 | 100 | 99.726 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 100 | 99.726 | sus_scrofa_berkshire | ENSSSCP00065035623 | 100 | 99.726 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 100 | 99.726 | sus_scrofa_pietrain | ENSSSCP00055024718 | 100 | 99.726 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 79.1781 | 73.1507 | bos_taurus | ENSBTAP00000013616 | 80.2778 | 74.1667 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 99.726 | 99.4521 | sus_scrofa_jinhua | ENSSSCP00060005269 | 99.726 | 99.4521 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 100 | 100 | sus_scrofa_bamei | ENSSSCP00050039731 | 100 | 100 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 79.1781 | 73.4247 | ovis_aries_rambouillet | ENSOARP00020031701 | 80.2778 | 74.4444 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 100 | 99.726 | sus_scrofa_largewhite | ENSSSCP00025041485 | 100 | 99.726 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 100 | 99.726 | sus_scrofa_hampshire | ENSSSCP00035028343 | 100 | 99.726 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 86.5753 | 84.3836 | sus_scrofa_usmarc | ENSSSCP00070007644 | 87.7778 | 85.5556 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 63.0137 | 60.5479 | sus_scrofa_wuzhishan | ENSSSCP00005017120 | 81.8505 | 78.6477 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 100 | 99.726 | sus_scrofa_rongchang | ENSSSCP00030030477 | 100 | 99.726 |
ENSSSCG00015009802 | sus_scrofa_tibetan | ENSSSCP00015004979 | 100 | 99.726 | sus_scrofa_landrace | ENSSSCP00045008327 | 100 | 99.726 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |