Description

Ensembl ID ENSSSCG00015009802 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 20351 bases Strand Plus strand
Position AORO02013936.1 : 1175681 - 1196031 RNA binding domain SpoU_sub_bind , SpoU_methylase
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00015004971 SpoU_sub_bind PF08032 6.7e-14 1
ENSSSCP00015004971 SpoU_methylase PF00588 8.8e-28 2
ENSSSCP00015004979 SpoU_sub_bind PF08032 7.3e-14 1
ENSSSCP00015004979 SpoU_methylase PF00588 1.4e-26 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00015012858 6395 361aa ENSSSCP00015004971
- ENSSSCT00015012891 2653 365aa ENSSSCP00015004979

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP000150217479.391195.89378sus_scrofa_tibetanENSSSCP0001500497939.72624.9315
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001502985930.094815.1659sus_scrofa_tibetanENSSSCP0001500497934.794517.5342

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497978.904172.6027equus_caballusENSECAP0000002271281.126874.6479
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497910099.726sus_scrofaENSSSCP0000001874510099.726
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497910099.726sus_scrofa_meishanENSSSCP0004004647510099.726
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497910099.726sus_scrofa_berkshireENSSSCP0006503562310099.726
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497910099.726sus_scrofa_pietrainENSSSCP0005502471810099.726
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497979.178173.1507bos_taurusENSBTAP0000001361680.277874.1667
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497999.72699.4521sus_scrofa_jinhuaENSSSCP0006000526999.72699.4521
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP00015004979100100sus_scrofa_bameiENSSSCP00050039731100100
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497979.178173.4247ovis_aries_rambouilletENSOARP0002003170180.277874.4444
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497910099.726sus_scrofa_largewhiteENSSSCP0002504148510099.726
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497910099.726sus_scrofa_hampshireENSSSCP0003502834310099.726
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497986.575384.3836sus_scrofa_usmarcENSSSCP0007000764487.777885.5556
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497963.013760.5479sus_scrofa_wuzhishanENSSSCP0000501712081.850578.6477
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497910099.726sus_scrofa_rongchangENSSSCP0003003047710099.726
ENSSSCG00015009802sus_scrofa_tibetanENSSSCP0001500497910099.726sus_scrofa_landraceENSSSCP0004500832710099.726

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression