| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00005036633 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
48309 bases |
Strand |
Minus strand |
| Position |
KQ004445.1 : 4538508 - 4586816 |
RNA binding domain |
RRM_5 , RRM_8 , RRM_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00005036793 |
RRM_5 |
PF13893 |
1.2e-46 |
1 |
| ENSSSCP00005036793 |
RRM_5 |
PF13893 |
1.2e-46 |
2 |
| ENSSSCP00005036793 |
RRM_8 |
PF11835 |
7.2e-12 |
3 |
| ENSSSCP00005036793 |
RRM_1 |
PF00076 |
5.1e-20 |
4 |
| ENSSSCP00005036823 |
RRM_5 |
PF13893 |
1.2e-46 |
1 |
| ENSSSCP00005036823 |
RRM_5 |
PF13893 |
1.2e-46 |
2 |
| ENSSSCP00005036823 |
RRM_8 |
PF11835 |
7.8e-12 |
3 |
| ENSSSCP00005036823 |
RRM_1 |
PF00076 |
6.3e-20 |
4 |
| ENSSSCP00005036525 |
RRM_5 |
PF13893 |
1.3e-46 |
1 |
| ENSSSCP00005036525 |
RRM_5 |
PF13893 |
1.3e-46 |
2 |
| ENSSSCP00005036525 |
RRM_8 |
PF11835 |
8.2e-12 |
3 |
| ENSSSCP00005036525 |
RRM_1 |
PF00076 |
6.4e-20 |
4 |
| ENSSSCP00005036659 |
RRM_5 |
PF13893 |
4.3e-45 |
1 |
| ENSSSCP00005036659 |
RRM_5 |
PF13893 |
4.3e-45 |
2 |
| ENSSSCP00005036659 |
RRM_8 |
PF11835 |
1e-11 |
3 |
| ENSSSCP00005036777 |
RRM_5 |
PF13893 |
7.6e-43 |
1 |
| ENSSSCP00005036848 |
RRM_8 |
PF11835 |
3.1e-12 |
1 |
| ENSSSCP00005036848 |
RRM_1 |
PF00076 |
3.9e-13 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00005059153 |
1458 |
485aa |
ENSSSCP00005036525 |
| - |
ENSSSCT00005059365 |
1509 |
502aa |
ENSSSCP00005036659 |
| - |
ENSSSCT00005059569 |
1407 |
468aa |
ENSSSCP00005036777 |
| - |
ENSSSCT00005059587 |
1368 |
455aa |
ENSSSCP00005036793 |
| - |
ENSSSCT00005059620 |
1416 |
471aa |
ENSSSCP00005036823 |
| - |
ENSSSCT00005059655 |
696 |
232aa |
ENSSSCP00005036848 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005045173 | 60.0694 | 48.4375 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 68.9243 | 55.5777 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 35.6473 | 20.4503 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 37.8486 | 21.7131 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 37.0577 | 22.1601 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 39.6414 | 23.7052 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005018675 | 36.2039 | 19.8594 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 41.0359 | 22.51 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005012054 | 10.5306 | 4.97959 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 25.6972 | 12.1514 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 85.0598 | 83.6653 | sus_scrofa_berkshire | ENSSSCP00065022155 | 78.0622 | 76.7824 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 85.259 | 84.4622 | sus_scrofa | ENSSSCP00000023009 | 78.245 | 77.5137 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 84.2629 | 83.8645 | sus_scrofa_bamei | ENSSSCP00050035298 | 77.3309 | 76.9653 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 84.0637 | 83.4661 | sus_scrofa_rongchang | ENSSSCP00030043774 | 77.1481 | 76.5996 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 84.2629 | 83.8645 | sus_scrofa_landrace | ENSSSCP00045045509 | 77.3309 | 76.9653 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 87.251 | 87.0518 | equus_caballus | ENSECAP00000056245 | 76.3066 | 76.1324 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 85.0598 | 83.6653 | sus_scrofa_meishan | ENSSSCP00040037322 | 78.0622 | 76.7824 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 87.4502 | 87.4502 | bos_taurus | ENSBTAP00000027405 | 81.146 | 81.146 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 84.0637 | 83.4661 | sus_scrofa_hampshire | ENSSSCP00035009417 | 77.1481 | 76.5996 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 84.2629 | 83.8645 | sus_scrofa_jinhua | ENSSSCP00060047076 | 77.3309 | 76.9653 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 84.2629 | 83.8645 | sus_scrofa_largewhite | ENSSSCP00025042379 | 77.3309 | 76.9653 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 84.0637 | 83.4661 | sus_scrofa_pietrain | ENSSSCP00055000169 | 77.1481 | 76.5996 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 85.259 | 84.4622 | sus_scrofa_usmarc | ENSSSCP00070008683 | 78.245 | 77.5137 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 84.2629 | 83.8645 | sus_scrofa_tibetan | ENSSSCP00015012122 | 77.3309 | 76.9653 |
| ENSSSCG00005036633 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 87.4502 | 87.4502 | ovis_aries_rambouillet | ENSOARP00020000466 | 80.9963 | 80.9963 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
