Description

Ensembl ID ENSSSCG00005033118 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 21648 bases Strand Plus strand
Position KQ004282.1 : 1319699 - 1341346 RNA binding domain ResIII , UPF1_1B_dom , UPF1_Zn_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00005033152 ResIII PF04851 3.9e-05 1
ENSSSCP00005033152 UPF1_1B_dom PF18141 5.3e-29 2
ENSSSCP00005033152 UPF1_Zn_bind PF09416 3.1e-77 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00005053741 3138 1045aa ENSSSCP00005033152

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000500830130.907219.9367sus_scrofa_wuzhishanENSSSCP0000503315228.038318.0861
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000502910324.351514.8227sus_scrofa_wuzhishanENSSSCP0000503315244.019126.7943
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000501312516.1889.29504sus_scrofa_wuzhishanENSSSCP0000503315229.665117.0335
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP000050229604027.2sus_scrofa_wuzhishanENSSSCP000050331524.784693.25359
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000501065326.186115.5109sus_scrofa_wuzhishanENSSSCP0000503315227.464116.2679
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000500635919.638111.193sus_scrofa_wuzhishanENSSSCP0000503315228.038315.9809
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000500509614.12837.67414sus_scrofa_wuzhishanENSSSCP0000503315234.354118.6603
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000502866525.023115.7895sus_scrofa_wuzhishanENSSSCP0000503315225.93316.3636
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000504557611.50856.30312sus_scrofa_wuzhishanENSSSCP0000503315231.100517.0335

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_berkshireENSSSCP0006501474891.044890.957
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofaENSSSCP0000003653592.014291.9255
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_bameiENSSSCP0005003682491.044890.957
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_rongchangENSSSCP0003002917591.044890.957
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_landraceENSSSCP0004503395291.044890.957
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.043198.9474equus_caballusENSECAP0000005727691.836791.748
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_meishanENSSSCP0004003666491.044890.957
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.138899.0431bos_taurusENSBTAP0000002786891.925591.8367
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_hampshireENSSSCP0003503925791.044890.957
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_jinhuaENSSSCP0006002385891.044890.957
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_largewhiteENSSSCP0002501984891.044890.957
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_pietrainENSSSCP0005503192392.014291.9255
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_usmarcENSSSCP0007002392992.014291.9255
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.234599.1388sus_scrofa_tibetanENSSSCP0001503414791.044890.957
ENSSSCG00005033118sus_scrofa_wuzhishanENSSSCP0000503315299.138899.0431ovis_aries_rambouilletENSOARP0002000435891.925591.8367

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression