RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00005033118 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
21648 bases |
Strand |
Plus strand |
Position |
KQ004282.1 : 1319699 - 1341346 |
RNA binding domain |
ResIII , UPF1_1B_dom , UPF1_Zn_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00005033152 |
ResIII |
PF04851 |
3.9e-05 |
1 |
ENSSSCP00005033152 |
UPF1_1B_dom |
PF18141 |
5.3e-29 |
2 |
ENSSSCP00005033152 |
UPF1_Zn_bind |
PF09416 |
3.1e-77 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00005053741 |
3138 |
1045aa |
ENSSSCP00005033152 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005008301 | 30.9072 | 19.9367 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 28.0383 | 18.0861 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005029103 | 24.3515 | 14.8227 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 44.0191 | 26.7943 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005013125 | 16.188 | 9.29504 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 29.6651 | 17.0335 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005022960 | 40 | 27.2 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 4.78469 | 3.25359 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005010653 | 26.1861 | 15.5109 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 27.4641 | 16.2679 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005006359 | 19.6381 | 11.193 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 28.0383 | 15.9809 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005005096 | 14.1283 | 7.67414 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 34.3541 | 18.6603 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005028665 | 25.0231 | 15.7895 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 25.933 | 16.3636 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005045576 | 11.5085 | 6.30312 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 31.1005 | 17.0335 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_berkshire | ENSSSCP00065014748 | 91.0448 | 90.957 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa | ENSSSCP00000036535 | 92.0142 | 91.9255 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_bamei | ENSSSCP00050036824 | 91.0448 | 90.957 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_rongchang | ENSSSCP00030029175 | 91.0448 | 90.957 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_landrace | ENSSSCP00045033952 | 91.0448 | 90.957 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.0431 | 98.9474 | equus_caballus | ENSECAP00000057276 | 91.8367 | 91.748 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_meishan | ENSSSCP00040036664 | 91.0448 | 90.957 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.1388 | 99.0431 | bos_taurus | ENSBTAP00000027868 | 91.9255 | 91.8367 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_hampshire | ENSSSCP00035039257 | 91.0448 | 90.957 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_jinhua | ENSSSCP00060023858 | 91.0448 | 90.957 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_largewhite | ENSSSCP00025019848 | 91.0448 | 90.957 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_pietrain | ENSSSCP00055031923 | 92.0142 | 91.9255 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_usmarc | ENSSSCP00070023929 | 92.0142 | 91.9255 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.2345 | 99.1388 | sus_scrofa_tibetan | ENSSSCP00015034147 | 91.0448 | 90.957 |
ENSSSCG00005033118 | sus_scrofa_wuzhishan | ENSSSCP00005033152 | 99.1388 | 99.0431 | ovis_aries_rambouillet | ENSOARP00020004358 | 91.9255 | 91.8367 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |