RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00005030262 | Gene ID |
100525399 |
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
alanyl-tRNA synthetase 1 |
Status |
Confidence |
Length |
23506 bases |
Strand |
Plus strand |
Position |
KQ003761.1 : 10932285 - 10955790 |
RNA binding domain |
tRNA-synt_2c , tRNA_SAD , DHHA1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00005029602 |
tRNA-synt_2c |
PF01411 |
1.2e-226 |
1 |
ENSSSCP00005029602 |
tRNA_SAD |
PF07973 |
1.2e-17 |
2 |
ENSSSCP00005029641 |
tRNA-synt_2c |
PF01411 |
1.2e-226 |
1 |
ENSSSCP00005029641 |
tRNA_SAD |
PF07973 |
1.2e-17 |
2 |
ENSSSCP00005029586 |
tRNA-synt_2c |
PF01411 |
1.5e-226 |
1 |
ENSSSCP00005029586 |
tRNA_SAD |
PF07973 |
1.3e-17 |
2 |
ENSSSCP00005029586 |
DHHA1 |
PF02272 |
4.7e-18 |
3 |
ENSSSCP00005029657 |
tRNA-synt_2c |
PF01411 |
1.5e-194 |
1 |
ENSSSCP00005029657 |
tRNA-synt_2c |
PF01411 |
1.5e-194 |
2 |
ENSSSCP00005029657 |
tRNA_SAD |
PF07973 |
1.3e-17 |
3 |
ENSSSCP00005029657 |
DHHA1 |
PF02272 |
4.4e-18 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00005048064 |
3488 |
968aa |
ENSSSCP00005029586 |
- |
ENSSSCT00005048086 |
3684 |
894aa |
ENSSSCP00005029602 |
- |
ENSSSCT00005048138 |
3774 |
894aa |
ENSSSCP00005029641 |
- |
ENSSSCT00005048156 |
2808 |
935aa |
ENSSSCP00005029657 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005037636 | 61.1336 | 44.0283 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 62.3967 | 44.938 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005008599 | 41.2621 | 23.0583 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 17.562 | 9.81405 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.6901 | 99.6901 | sus_scrofa_berkshire | ENSSSCP00065043554 | 99.6901 | 99.6901 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.6901 | 99.6901 | sus_scrofa | ENSSSCP00000081193 | 97.6721 | 97.6721 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.6901 | 99.3802 | sus_scrofa_bamei | ENSSSCP00050043651 | 99.6901 | 99.3802 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.7934 | 99.4835 | sus_scrofa_rongchang | ENSSSCP00030028937 | 92.1756 | 91.8893 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.7934 | 99.7934 | sus_scrofa_landrace | ENSSSCP00045019725 | 92.1756 | 92.1756 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 98.5537 | 97.2107 | equus_caballus | ENSECAP00000007094 | 93.8976 | 92.6181 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.7934 | 99.6901 | sus_scrofa_meishan | ENSSSCP00040005132 | 92.1756 | 92.0802 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 98.1405 | 96.0744 | bos_taurus | ENSBTAP00000026393 | 98.1405 | 96.0744 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.5868 | 99.2769 | sus_scrofa_hampshire | ENSSSCP00035005441 | 99.5868 | 99.2769 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.7934 | 99.7934 | sus_scrofa_jinhua | ENSSSCP00060000502 | 92.1756 | 92.1756 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.7934 | 99.4835 | sus_scrofa_largewhite | ENSSSCP00025003112 | 99.7934 | 99.4835 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.7934 | 99.7934 | sus_scrofa_pietrain | ENSSSCP00055000547 | 92.1756 | 92.1756 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.7934 | 99.7934 | sus_scrofa_usmarc | ENSSSCP00070005316 | 92.1756 | 92.1756 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 99.7934 | 99.6901 | sus_scrofa_tibetan | ENSSSCP00015020445 | 92.1756 | 92.0802 |
ENSSSCG00005030262 | sus_scrofa_wuzhishan | ENSSSCP00005029586 | 98.3471 | 95.8678 | ovis_aries_rambouillet | ENSOARP00020021772 | 98.3471 | 95.8678 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |