Description

Ensembl ID ENSSSCG00005030262 Gene ID 100525399 Accession -
Symbol Alias - Full Name alanyl-tRNA synthetase 1
Status Confidence Length 23506 bases Strand Plus strand
Position KQ003761.1 : 10932285 - 10955790 RNA binding domain tRNA-synt_2c , tRNA_SAD , DHHA1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00005029602 tRNA-synt_2c PF01411 1.2e-226 1
ENSSSCP00005029602 tRNA_SAD PF07973 1.2e-17 2
ENSSSCP00005029641 tRNA-synt_2c PF01411 1.2e-226 1
ENSSSCP00005029641 tRNA_SAD PF07973 1.2e-17 2
ENSSSCP00005029586 tRNA-synt_2c PF01411 1.5e-226 1
ENSSSCP00005029586 tRNA_SAD PF07973 1.3e-17 2
ENSSSCP00005029586 DHHA1 PF02272 4.7e-18 3
ENSSSCP00005029657 tRNA-synt_2c PF01411 1.5e-194 1
ENSSSCP00005029657 tRNA-synt_2c PF01411 1.5e-194 2
ENSSSCP00005029657 tRNA_SAD PF07973 1.3e-17 3
ENSSSCP00005029657 DHHA1 PF02272 4.4e-18 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00005048064 3488 968aa ENSSSCP00005029586
- ENSSSCT00005048086 3684 894aa ENSSSCP00005029602
- ENSSSCT00005048138 3774 894aa ENSSSCP00005029641
- ENSSSCT00005048156 2808 935aa ENSSSCP00005029657

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000503763661.133644.0283sus_scrofa_wuzhishanENSSSCP0000502958662.396744.938
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000500859941.262123.0583sus_scrofa_wuzhishanENSSSCP0000502958617.5629.81405

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.690199.6901sus_scrofa_berkshireENSSSCP0006504355499.690199.6901
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.690199.6901sus_scrofaENSSSCP0000008119397.672197.6721
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.690199.3802sus_scrofa_bameiENSSSCP0005004365199.690199.3802
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.793499.4835sus_scrofa_rongchangENSSSCP0003002893792.175691.8893
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.793499.7934sus_scrofa_landraceENSSSCP0004501972592.175692.1756
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958698.553797.2107equus_caballusENSECAP0000000709493.897692.6181
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.793499.6901sus_scrofa_meishanENSSSCP0004000513292.175692.0802
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958698.140596.0744bos_taurusENSBTAP0000002639398.140596.0744
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.586899.2769sus_scrofa_hampshireENSSSCP0003500544199.586899.2769
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.793499.7934sus_scrofa_jinhuaENSSSCP0006000050292.175692.1756
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.793499.4835sus_scrofa_largewhiteENSSSCP0002500311299.793499.4835
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.793499.7934sus_scrofa_pietrainENSSSCP0005500054792.175692.1756
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.793499.7934sus_scrofa_usmarcENSSSCP0007000531692.175692.1756
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958699.793499.6901sus_scrofa_tibetanENSSSCP0001502044592.175692.0802
ENSSSCG00005030262sus_scrofa_wuzhishanENSSSCP0000502958698.347195.8678ovis_aries_rambouilletENSOARP0002002177298.347195.8678

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression