Description

Ensembl ID ENSSSCG00005028020 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 79598 bases Strand Minus strand
Position KQ004002.1 : 5268924 - 5348521 RNA binding domain PWI
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00005028824 PWI PF01480 6.2e-10 1
ENSSSCP00005028669 PWI PF01480 6.4e-10 1
ENSSSCP00005028805 PWI PF01480 6.4e-10 1
ENSSSCP00005028860 PWI PF01480 0.00014 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00005046638 2949 982aa ENSSSCP00005028669
- ENSSSCT00005046834 3021 1006aa ENSSSCP00005028805
- ENSSSCT00005046859 2943 980aa ENSSSCP00005028824
- ENSSSCT00005046902 3006 1001aa ENSSSCP00005028860

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502452161.538545.842sus_scrofa_wuzhishanENSSSCP0000502880558.846943.837

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880597.216796.7197sus_scrofa_berkshireENSSSCP0006502727594.492894.0097
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880599.204899.2048sus_scrofaENSSSCP0000005331499.106399.1063
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880599.204899.2048sus_scrofa_bameiENSSSCP0005004058299.106399.1063
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880599.403699.4036sus_scrofa_rongchangENSSSCP0003004371291.575191.5751
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880599.204899.2048sus_scrofa_landraceENSSSCP0004504093399.106399.1063
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880596.520995.9245equus_caballusENSECAP0000001244096.138695.5446
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880599.204899.2048sus_scrofa_meishanENSSSCP0004002494799.106399.1063
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880599.105498.9066bos_taurusENSBTAP0000007297399.00798.8083
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880599.204899.2048sus_scrofa_hampshireENSSSCP0003500581499.106399.1063
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880599.204899.2048sus_scrofa_jinhuaENSSSCP0006001499499.106399.1063
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880597.216796.7197sus_scrofa_largewhiteENSSSCP0002503833294.492894.0097
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880599.204899.2048sus_scrofa_pietrainENSSSCP0005503414499.106399.1063
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880597.514997.0179sus_scrofa_usmarcENSSSCP0007003517797.709297.2112
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880599.204899.2048sus_scrofa_tibetanENSSSCP0001501851399.106399.1063
ENSSSCG00005028020sus_scrofa_wuzhishanENSSSCP0000502880597.216796.5209ovis_aries_rambouilletENSOARP0002002349994.492893.8164

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression