RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSSSCG00005026061	Gene ID	100525306	Accession	-
Symbol	MBNL1	Alias	-	Full Name	muscleblind like splicing regulator 1
Status	Confidence	Length	204956 bases	Strand	Plus strand
Position	KQ003771.1 : 10300128 - 10505083	RNA binding domain	zf-CCCH , zf-CCCH_2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSSCP00005025374	zf-CCCH	PF00642	2.6e-10	1
ENSSSCP00005025396	zf-CCCH	PF00642	3.1e-10	1
ENSSSCP00005025396	zf-CCCH_2	PF14608	3.9e-06	2
ENSSSCP00005025396	zf-CCCH_2	PF14608	3.9e-06	3
ENSSSCP00005025396	zf-CCCH_2	PF14608	3.9e-06	4
ENSSSCP00005025408	zf-CCCH	PF00642	3.5e-10	1
ENSSSCP00005025408	zf-CCCH_2	PF14608	4.3e-06	2
ENSSSCP00005025408	zf-CCCH_2	PF14608	4.3e-06	3
ENSSSCP00005025408	zf-CCCH_2	PF14608	4.3e-06	4
ENSSSCP00005025424	zf-CCCH	PF00642	4.4e-10	1
ENSSSCP00005025424	zf-CCCH_2	PF14608	6e-06	2
ENSSSCP00005025424	zf-CCCH_2	PF14608	6e-06	3
ENSSSCP00005025424	zf-CCCH_2	PF14608	6e-06	4
ENSSSCP00005025355	zf-CCCH	PF00642	6.4e-10	1
ENSSSCP00005025355	zf-CCCH_2	PF14608	9.3e-06	2
ENSSSCP00005025355	zf-CCCH_2	PF14608	9.3e-06	3
ENSSSCP00005025355	zf-CCCH_2	PF14608	9.3e-06	4
ENSSSCP00005025488	zf-CCCH	PF00642	4.4e-09	1
ENSSSCP00005025488	zf-CCCH_2	PF14608	8.2e-06	2
ENSSSCP00005025488	zf-CCCH_2	PF14608	8.2e-06	3
ENSSSCP00005025488	zf-CCCH_2	PF14608	8.2e-06	4
ENSSSCP00005025469	zf-CCCH	PF00642	5.8e-09	1
ENSSSCP00005025469	zf-CCCH_2	PF14608	1e-05	2
ENSSSCP00005025469	zf-CCCH_2	PF14608	1e-05	3
ENSSSCP00005025469	zf-CCCH_2	PF14608	1e-05	4
ENSSSCP00005025446	zf-CCCH	PF00642	6.7e-09	1
ENSSSCP00005025446	zf-CCCH_2	PF14608	1.2e-05	2
ENSSSCP00005025446	zf-CCCH_2	PF14608	1.2e-05	3
ENSSSCP00005025446	zf-CCCH_2	PF14608	1.2e-05	4
ENSSSCP00005025537	zf-CCCH	PF00642	1.7e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
MBNL1-205	ENSSSCT00005041469	5732	399aa	ENSSSCP00005025355
MBNL1-204	ENSSSCT00005041499	2129	339aa	ENSSSCP00005025374
MBNL1-203	ENSSSCT00005041533	2158	341aa	ENSSSCP00005025396
MBNL1-202	ENSSSCT00005041551	2153	347aa	ENSSSCP00005025408
MBNL1-201	ENSSSCT00005041576	2210	366aa	ENSSSCP00005025424
MBNL1-206	ENSSSCT00005041623	5752	436aa	ENSSSCP00005025446
MBNL1-207	ENSSSCT00005041663	5716	424aa	ENSSSCP00005025469
MBNL1-208	ENSSSCT00005041690	5659	406aa	ENSSSCP00005025488
MBNL1-209	ENSSSCT00005041759	2035	399aa	ENSSSCP00005025537

Gene Model

Click here to download ENSSSCG00005026061's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSSCG00005026061's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005003119	83.4906	76.8868	sus_scrofa_wuzhishan	ENSSSCP00005025446	40.5963	37.3853
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005007086	75.1429	65.4286	sus_scrofa_wuzhishan	ENSSSCP00005025446	60.3211	52.5229
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005009723	26.2069	15.8621	sus_scrofa_wuzhishan	ENSSSCP00005025446	26.1468	15.8257

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	78.211	78.211	sus_scrofa_berkshire	ENSSSCP00065025880	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	91.5138	91.5138	sus_scrofa	ENSSSCP00000043321	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	100	100	sus_scrofa_bamei	ENSSSCP00050010381	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	100	100	sus_scrofa_rongchang	ENSSSCP00030039038	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	100	100	sus_scrofa_landrace	ENSSSCP00045032190	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	83.4862	83.2569	equus_caballus	ENSECAP00000021919	98.3784	98.1081
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	100	100	sus_scrofa_meishan	ENSSSCP00040027470	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	99.7706	99.5413	bos_taurus	ENSBTAP00000069445	99.7706	99.5413
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	100	100	sus_scrofa_hampshire	ENSSSCP00035004864	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	100	100	sus_scrofa_jinhua	ENSSSCP00060010785	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	95.8716	95.6422	sus_scrofa_largewhite	ENSSSCP00025013989	100	99.7608
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	100	100	sus_scrofa_pietrain	ENSSSCP00055011543	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	100	100	sus_scrofa_usmarc	ENSSSCP00070005974	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	100	100	sus_scrofa_tibetan	ENSSSCP00015004133	100	100
ENSSSCG00005026061	sus_scrofa_wuzhishan	ENSSSCP00005025446	99.7706	99.5413	ovis_aries_rambouillet	ENSOARP00020004290	99.7706	99.5413

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression