RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00005024311 | Gene ID |
768100 |
Accession |
- |
Symbol |
PTBP3 |
Alias |
- |
Full Name |
polypyrimidine tract binding protein 3 |
Status |
Confidence |
Length |
102954 bases |
Strand |
Minus strand |
Position |
KQ002350.1 : 496560 - 599513 |
RNA binding domain |
RRM_5 , RRM_8 , RRM_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00005024724 |
RRM_5 |
PF13893 |
1.4e-61 |
1 |
ENSSSCP00005024724 |
RRM_5 |
PF13893 |
1.4e-61 |
2 |
ENSSSCP00005024724 |
RRM_5 |
PF13893 |
1.4e-61 |
3 |
ENSSSCP00005024724 |
RRM_8 |
PF11835 |
1.2e-14 |
4 |
ENSSSCP00005024724 |
RRM_1 |
PF00076 |
1.1e-29 |
5 |
ENSSSCP00005024724 |
RRM_1 |
PF00076 |
1.1e-29 |
6 |
ENSSSCP00005024724 |
RRM_1 |
PF00076 |
1.1e-29 |
7 |
ENSSSCP00005024783 |
RRM_5 |
PF13893 |
1.6e-60 |
1 |
ENSSSCP00005024783 |
RRM_5 |
PF13893 |
1.6e-60 |
2 |
ENSSSCP00005024783 |
RRM_5 |
PF13893 |
1.6e-60 |
3 |
ENSSSCP00005024783 |
RRM_8 |
PF11835 |
7.1e-15 |
4 |
ENSSSCP00005024783 |
RRM_1 |
PF00076 |
1.3e-26 |
5 |
ENSSSCP00005024783 |
RRM_1 |
PF00076 |
1.3e-26 |
6 |
ENSSSCP00005024783 |
RRM_1 |
PF00076 |
1.3e-26 |
7 |
ENSSSCP00005024747 |
RRM_5 |
PF13893 |
3.1e-59 |
1 |
ENSSSCP00005024747 |
RRM_5 |
PF13893 |
3.1e-59 |
2 |
ENSSSCP00005024747 |
RRM_5 |
PF13893 |
3.1e-59 |
3 |
ENSSSCP00005024747 |
RRM_8 |
PF11835 |
1.7e-14 |
4 |
ENSSSCP00005024747 |
RRM_1 |
PF00076 |
4.6e-27 |
5 |
ENSSSCP00005024747 |
RRM_1 |
PF00076 |
4.6e-27 |
6 |
ENSSSCP00005024874 |
RRM_5 |
PF13893 |
4.6e-50 |
1 |
ENSSSCP00005024874 |
RRM_5 |
PF13893 |
4.6e-50 |
2 |
ENSSSCP00005024874 |
RRM_5 |
PF13893 |
4.6e-50 |
3 |
ENSSSCP00005024874 |
RRM_8 |
PF11835 |
1.9e-14 |
4 |
ENSSSCP00005024874 |
RRM_1 |
PF00076 |
1.4e-25 |
5 |
ENSSSCP00005024874 |
RRM_1 |
PF00076 |
1.4e-25 |
6 |
ENSSSCP00005024839 |
RRM_5 |
PF13893 |
5.7e-50 |
1 |
ENSSSCP00005024839 |
RRM_5 |
PF13893 |
5.7e-50 |
2 |
ENSSSCP00005024839 |
RRM_5 |
PF13893 |
5.7e-50 |
3 |
ENSSSCP00005024839 |
RRM_8 |
PF11835 |
2e-14 |
4 |
ENSSSCP00005024839 |
RRM_1 |
PF00076 |
1.7e-25 |
5 |
ENSSSCP00005024839 |
RRM_1 |
PF00076 |
1.7e-25 |
6 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
PTBP3-201 |
ENSSSCT00005040410 |
6592 |
526aa |
ENSSSCP00005024724 |
PTBP3-202 |
ENSSSCT00005040444 |
6167 |
496aa |
ENSSSCP00005024747 |
PTBP3-203 |
ENSSSCT00005040488 |
5693 |
428aa |
ENSSSCP00005024783 |
PTBP3-205 |
ENSSSCT00005040590 |
1602 |
533aa |
ENSSSCP00005024839 |
PTBP3-204 |
ENSSSCT00005040654 |
1557 |
518aa |
ENSSSCP00005024874 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 81.0056 | 67.784 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 81.6135 | 68.2927 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 37.8486 | 21.7131 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 35.6473 | 20.4503 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005045173 | 36.2847 | 21.0069 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 39.212 | 22.7017 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005018675 | 78.2074 | 69.2443 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 83.4897 | 73.9212 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005012054 | 15.3469 | 8.2449 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 35.272 | 18.9493 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa_berkshire | ENSSSCP00065018776 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa | ENSSSCP00000005863 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa_bamei | ENSSSCP00050043341 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa_rongchang | ENSSSCP00030009693 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa_landrace | ENSSSCP00045040896 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 93.4334 | 91.3696 | equus_caballus | ENSECAP00000042243 | 62.3279 | 60.9512 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa_meishan | ENSSSCP00040032330 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 98.8743 | 97.7486 | bos_taurus | ENSBTAP00000057353 | 94.7842 | 93.705 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa_hampshire | ENSSSCP00035011580 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa_jinhua | ENSSSCP00060032869 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa_largewhite | ENSSSCP00025035193 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 93.0582 | 90.0563 | sus_scrofa_pietrain | ENSSSCP00055015021 | 89.2086 | 86.3309 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa_usmarc | ENSSSCP00070036873 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 99.8124 | 99.6248 | sus_scrofa_tibetan | ENSSSCP00015013438 | 95.5117 | 95.3321 |
ENSSSCG00005024311 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 96.6229 | 94.5591 | ovis_aries_rambouillet | ENSOARP00020028335 | 60.3751 | 59.0856 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |