RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00005023001 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
94989 bases |
Strand |
Minus strand |
Position |
KQ004121.1 : 416685 - 511673 |
RNA binding domain |
zf-CCCH , zf-CCCH_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00005022226 |
zf-CCCH |
PF00642 |
2.6e-11 |
1 |
ENSSSCP00005022226 |
zf-CCCH |
PF00642 |
2.6e-11 |
2 |
ENSSSCP00005022226 |
zf-CCCH_2 |
PF14608 |
2.9e-11 |
3 |
ENSSSCP00005022226 |
zf-CCCH_2 |
PF14608 |
2.9e-11 |
4 |
ENSSSCP00005022226 |
zf-CCCH_2 |
PF14608 |
2.9e-11 |
5 |
ENSSSCP00005022264 |
zf-CCCH |
PF00642 |
2.9e-11 |
1 |
ENSSSCP00005022264 |
zf-CCCH |
PF00642 |
2.9e-11 |
2 |
ENSSSCP00005022264 |
zf-CCCH_2 |
PF14608 |
3.1e-11 |
3 |
ENSSSCP00005022264 |
zf-CCCH_2 |
PF14608 |
3.1e-11 |
4 |
ENSSSCP00005022264 |
zf-CCCH_2 |
PF14608 |
3.1e-11 |
5 |
ENSSSCP00005022331 |
zf-CCCH |
PF00642 |
2.9e-11 |
1 |
ENSSSCP00005022331 |
zf-CCCH |
PF00642 |
2.9e-11 |
2 |
ENSSSCP00005022331 |
zf-CCCH_2 |
PF14608 |
3.1e-11 |
3 |
ENSSSCP00005022331 |
zf-CCCH_2 |
PF14608 |
3.1e-11 |
4 |
ENSSSCP00005022331 |
zf-CCCH_2 |
PF14608 |
3.1e-11 |
5 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSSSCT00005036388 |
3862 |
1151aa |
ENSSSCP00005022226 |
- |
ENSSSCT00005036448 |
3952 |
1181aa |
ENSSSCP00005022264 |
- |
ENSSSCT00005036555 |
3552 |
1183aa |
ENSSSCP00005022331 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022383 | 63.1068 | 44.9838 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 16.4835 | 11.7498 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005010456 | 46.6351 | 33.8389 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 41.5892 | 30.1775 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 96.027 | 96.027 | sus_scrofa_berkshire | ENSSSCP00065037093 | 98.9547 | 98.9547 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 98.9856 | 98.9856 | sus_scrofa | ENSSSCP00000048583 | 98.9856 | 98.9856 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 96.1116 | 96.1116 | sus_scrofa_bamei | ENSSSCP00050046107 | 99.0418 | 99.0418 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 99.0702 | 99.0702 | sus_scrofa_rongchang | ENSSSCP00030040543 | 99.0702 | 99.0702 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 96.027 | 96.027 | sus_scrofa_landrace | ENSSSCP00045023085 | 98.9547 | 98.9547 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 91.9696 | 89.1801 | equus_caballus | ENSECAP00000080408 | 90.5912 | 87.8435 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 99.0702 | 99.0702 | sus_scrofa_meishan | ENSSSCP00040034383 | 99.0702 | 99.0702 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 15.7227 | 14.962 | bos_taurus | ENSBTAP00000027514 | 91.1765 | 86.7647 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 98.9856 | 98.9856 | sus_scrofa_hampshire | ENSSSCP00035012651 | 98.9856 | 98.9856 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 96.1116 | 96.1116 | sus_scrofa_jinhua | ENSSSCP00060033911 | 99.0418 | 99.0418 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 96.027 | 96.027 | sus_scrofa_largewhite | ENSSSCP00025001960 | 98.9547 | 98.9547 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 98.9011 | 98.9011 | sus_scrofa_pietrain | ENSSSCP00055009421 | 98.9011 | 98.9011 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 98.9856 | 98.9856 | sus_scrofa_usmarc | ENSSSCP00070038840 | 98.9856 | 98.9856 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 90.279 | 89.5182 | sus_scrofa_tibetan | ENSSSCP00015035717 | 96.1296 | 95.3195 |
ENSSSCG00005023001 | sus_scrofa_wuzhishan | ENSSSCP00005022331 | 89.6027 | 85.5452 | ovis_aries_rambouillet | ENSOARP00020002524 | 90.5983 | 86.4957 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |