| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00005018731 | Gene ID |
449526 |
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
glutamyl-prolyl-tRNA synthetase 1 |
| Status |
Confidence |
Length |
63101 bases |
Strand |
Plus strand |
| Position |
KQ003120.1 : 854782 - 917882 |
RNA binding domain |
ProRS-C_1 , HGTP_anticodon , tRNA-synt_2b , tRNA-synt_1c , tRNA-synt_1c_C |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00005018567 |
ProRS-C_1 |
PF09180 |
4.5e-21 |
1 |
| ENSSSCP00005018567 |
HGTP_anticodon |
PF03129 |
1.9e-17 |
2 |
| ENSSSCP00005018567 |
tRNA-synt_2b |
PF00587 |
6.7e-17 |
3 |
| ENSSSCP00005018567 |
tRNA-synt_1c |
PF00749 |
7.2e-125 |
4 |
| ENSSSCP00005018567 |
tRNA-synt_1c_C |
PF03950 |
8.3e-40 |
5 |
| ENSSSCP00005018593 |
ProRS-C_1 |
PF09180 |
4.6e-21 |
1 |
| ENSSSCP00005018593 |
HGTP_anticodon |
PF03129 |
1.7e-17 |
2 |
| ENSSSCP00005018593 |
tRNA-synt_2b |
PF00587 |
6.4e-17 |
3 |
| ENSSSCP00005018593 |
tRNA-synt_1c |
PF00749 |
6e-124 |
4 |
| ENSSSCP00005018593 |
tRNA-synt_1c_C |
PF03950 |
7.7e-40 |
5 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSSCT00005030407 |
4614 |
1537aa |
ENSSSCP00005018567 |
| - |
ENSSSCT00005030451 |
4518 |
1505aa |
ENSSSCP00005018593 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005004146 | 50 | 31.7073 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 18.6727 | 11.8412 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005014731 | 46.5969 | 30.0175 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 17.3715 | 11.1906 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005008464 | 33.9844 | 19.5312 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 11.3208 | 6.50618 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005045798 | 41.6774 | 26.4516 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 21.015 | 13.3377 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 99.9349 | 99.9349 | sus_scrofa_berkshire | ENSSSCP00065011459 | 99.9349 | 99.9349 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 97.7228 | 97.5927 | sus_scrofa | ENSSSCP00000034014 | 98.8808 | 98.7492 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 99.9349 | 99.8699 | sus_scrofa_bamei | ENSSSCP00050030010 | 99.4819 | 99.4171 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 97.7879 | 97.6578 | sus_scrofa_rongchang | ENSSSCP00030028990 | 98.9467 | 98.815 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 99.8699 | 99.8699 | sus_scrofa_landrace | ENSSSCP00045042984 | 99.8699 | 99.8699 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 94.6649 | 91.8022 | equus_caballus | ENSECAP00000045443 | 95.7867 | 92.8901 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 98.1783 | 97.9831 | sus_scrofa_meishan | ENSSSCP00040033293 | 98.8212 | 98.6248 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 95.0553 | 92.4528 | bos_taurus | ENSBTAP00000071506 | 96.2451 | 93.61 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 97.7228 | 97.5927 | sus_scrofa_hampshire | ENSSSCP00035021409 | 98.8808 | 98.7492 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 97.7228 | 97.5927 | sus_scrofa_jinhua | ENSSSCP00060027079 | 98.8808 | 98.7492 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 97.7228 | 97.5927 | sus_scrofa_largewhite | ENSSSCP00025009408 | 98.8808 | 98.7492 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 99.9349 | 99.9349 | sus_scrofa_pietrain | ENSSSCP00055013253 | 99.9349 | 99.9349 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 97.7228 | 97.5927 | sus_scrofa_usmarc | ENSSSCP00070018171 | 98.8808 | 98.7492 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 99.9349 | 99.8699 | sus_scrofa_tibetan | ENSSSCP00015029623 | 99.9349 | 99.8699 |
| ENSSSCG00005018731 | sus_scrofa_wuzhishan | ENSSSCP00005018567 | 95.0553 | 92.4528 | ovis_aries_rambouillet | ENSOARP00020010952 | 96.2451 | 93.61 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
