RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00005009115 | Gene ID |
100515203 |
Accession |
- |
Symbol |
PTBP2 |
Alias |
- |
Full Name |
polypyrimidine tract binding protein 2 |
Status |
Confidence |
Length |
80824 bases |
Strand |
Plus strand |
Position |
KQ003757.1 : 1928880 - 2009703 |
RNA binding domain |
RRM_5 , RRM_8 , RRM_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00005008745 |
RRM_5 |
PF13893 |
1.7e-55 |
1 |
ENSSSCP00005008745 |
RRM_5 |
PF13893 |
1.7e-55 |
2 |
ENSSSCP00005008745 |
RRM_5 |
PF13893 |
1.7e-55 |
3 |
ENSSSCP00005008745 |
RRM_8 |
PF11835 |
1.1e-15 |
4 |
ENSSSCP00005008745 |
RRM_1 |
PF00076 |
1.5e-31 |
5 |
ENSSSCP00005008745 |
RRM_1 |
PF00076 |
1.5e-31 |
6 |
ENSSSCP00005008745 |
RRM_1 |
PF00076 |
1.5e-31 |
7 |
ENSSSCP00005008488 |
RRM_5 |
PF13893 |
2.3e-55 |
1 |
ENSSSCP00005008488 |
RRM_5 |
PF13893 |
2.3e-55 |
2 |
ENSSSCP00005008488 |
RRM_5 |
PF13893 |
2.3e-55 |
3 |
ENSSSCP00005008488 |
RRM_8 |
PF11835 |
1.2e-15 |
4 |
ENSSSCP00005008488 |
RRM_1 |
PF00076 |
2.2e-31 |
5 |
ENSSSCP00005008488 |
RRM_1 |
PF00076 |
2.2e-31 |
6 |
ENSSSCP00005008488 |
RRM_1 |
PF00076 |
2.2e-31 |
7 |
ENSSSCP00005009005 |
RRM_5 |
PF13893 |
3e-54 |
1 |
ENSSSCP00005009005 |
RRM_5 |
PF13893 |
3e-54 |
2 |
ENSSSCP00005009005 |
RRM_8 |
PF11835 |
1.3e-15 |
3 |
ENSSSCP00005009005 |
RRM_1 |
PF00076 |
8.9e-32 |
4 |
ENSSSCP00005009005 |
RRM_1 |
PF00076 |
8.9e-32 |
5 |
ENSSSCP00005009005 |
RRM_1 |
PF00076 |
8.9e-32 |
6 |
ENSSSCP00005009037 |
RRM_5 |
PF13893 |
9.1e-53 |
1 |
ENSSSCP00005009037 |
RRM_5 |
PF13893 |
9.1e-53 |
2 |
ENSSSCP00005009037 |
RRM_8 |
PF11835 |
1.2e-15 |
3 |
ENSSSCP00005009037 |
RRM_1 |
PF00076 |
4.5e-25 |
4 |
ENSSSCP00005009037 |
RRM_1 |
PF00076 |
4.5e-25 |
5 |
ENSSSCP00005008967 |
RRM_5 |
PF13893 |
2.4e-11 |
1 |
ENSSSCP00005008967 |
RRM_8 |
PF11835 |
2e-15 |
2 |
ENSSSCP00005008967 |
RRM_1 |
PF00076 |
1.1e-12 |
3 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
PTBP2-201 |
ENSSSCT00005014237 |
3068 |
537aa |
ENSSSCP00005008488 |
PTBP2-202 |
ENSSSCT00005014647 |
3271 |
501aa |
ENSSSCP00005008745 |
PTBP2-205 |
ENSSSCT00005015019 |
3019 |
356aa |
ENSSSCP00005008967 |
PTBP2-204 |
ENSSSCT00005015100 |
2134 |
531aa |
ENSSSCP00005009005 |
PTBP2-203 |
ENSSSCT00005015151 |
2047 |
506aa |
ENSSSCP00005009037 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005024839 | 81.6135 | 68.2927 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 81.0056 | 67.784 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005036659 | 39.6414 | 23.7052 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 37.0577 | 22.1601 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005045173 | 36.9792 | 22.2222 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 39.6648 | 23.8361 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005018675 | 78.5589 | 67.4868 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 83.2402 | 71.5084 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005012054 | 14.6939 | 8 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 33.5196 | 18.2495 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | sus_scrofa_berkshire | ENSSSCP00065030014 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | sus_scrofa | ENSSSCP00000022075 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | sus_scrofa_bamei | ENSSSCP00050006571 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | sus_scrofa_rongchang | ENSSSCP00030032034 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | sus_scrofa_landrace | ENSSSCP00045040384 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | equus_caballus | ENSECAP00000078860 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | sus_scrofa_meishan | ENSSSCP00040018760 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 97.3929 | 96.8343 | bos_taurus | ENSBTAP00000071225 | 98.3083 | 97.7444 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | sus_scrofa_hampshire | ENSSSCP00035006619 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | sus_scrofa_jinhua | ENSSSCP00060005711 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | sus_scrofa_largewhite | ENSSSCP00025036644 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.4413 | 99.4413 | sus_scrofa_pietrain | ENSSSCP00055002701 | 99.4413 | 99.4413 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 98.324 | 98.324 | sus_scrofa_usmarc | ENSSSCP00070019951 | 99.2481 | 99.2481 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 92.1788 | 91.9926 | sus_scrofa_tibetan | ENSSSCP00015019440 | 98.8024 | 98.6028 |
ENSSSCG00005009115 | sus_scrofa_wuzhishan | ENSSSCP00005008488 | 99.2551 | 98.6965 | ovis_aries_rambouillet | ENSOARP00020001420 | 99.4403 | 98.8806 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |