| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSSCG00005005936 | Gene ID |
100516319 |
Accession |
- |
| Symbol |
STAU2 |
Alias |
- |
Full Name |
staufen double-stranded RNA binding protein 2 |
| Status |
Confidence |
Length |
316577 bases |
Strand |
Plus strand |
| Position |
KQ002625.1 : 1296157 - 1612733 |
RNA binding domain |
dsrm , Staufen_C |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSSCP00005005520 |
dsrm |
PF00035 |
8.2e-47 |
1 |
| ENSSSCP00005005520 |
dsrm |
PF00035 |
8.2e-47 |
2 |
| ENSSSCP00005005520 |
dsrm |
PF00035 |
8.2e-47 |
3 |
| ENSSSCP00005005520 |
Staufen_C |
PF16482 |
1.7e-43 |
4 |
| ENSSSCP00005005411 |
dsrm |
PF00035 |
1e-46 |
1 |
| ENSSSCP00005005411 |
dsrm |
PF00035 |
1e-46 |
2 |
| ENSSSCP00005005411 |
dsrm |
PF00035 |
1e-46 |
3 |
| ENSSSCP00005005411 |
Staufen_C |
PF16482 |
2.2e-43 |
4 |
| ENSSSCP00005005580 |
dsrm |
PF00035 |
1e-46 |
1 |
| ENSSSCP00005005580 |
dsrm |
PF00035 |
1e-46 |
2 |
| ENSSSCP00005005580 |
dsrm |
PF00035 |
1e-46 |
3 |
| ENSSSCP00005005580 |
Staufen_C |
PF16482 |
2.4e-43 |
4 |
| ENSSSCP00005005532 |
dsrm |
PF00035 |
1.8e-45 |
1 |
| ENSSSCP00005005532 |
dsrm |
PF00035 |
1.8e-45 |
2 |
| ENSSSCP00005005532 |
dsrm |
PF00035 |
1.8e-45 |
3 |
| ENSSSCP00005005532 |
Staufen_C |
PF16482 |
1.6e-18 |
4 |
| ENSSSCP00005005336 |
dsrm |
PF00035 |
7.8e-40 |
1 |
| ENSSSCP00005005336 |
dsrm |
PF00035 |
7.8e-40 |
2 |
| ENSSSCP00005005336 |
Staufen_C |
PF16482 |
1.4e-43 |
3 |
| ENSSSCP00005005547 |
dsrm |
PF00035 |
3.2e-39 |
1 |
| ENSSSCP00005005547 |
dsrm |
PF00035 |
3.2e-39 |
2 |
| ENSSSCP00005005547 |
Staufen_C |
PF16482 |
1.3e-43 |
3 |
| ENSSSCP00005005509 |
dsrm |
PF00035 |
8.5e-39 |
1 |
| ENSSSCP00005005509 |
dsrm |
PF00035 |
8.5e-39 |
2 |
| ENSSSCP00005005509 |
dsrm |
PF00035 |
8.5e-39 |
3 |
| ENSSSCP00005005509 |
Staufen_C |
PF16482 |
4.5e-19 |
4 |
| ENSSSCP00005005557 |
dsrm |
PF00035 |
8.5e-39 |
1 |
| ENSSSCP00005005557 |
dsrm |
PF00035 |
8.5e-39 |
2 |
| ENSSSCP00005005557 |
dsrm |
PF00035 |
8.5e-39 |
3 |
| ENSSSCP00005005557 |
Staufen_C |
PF16482 |
4.5e-19 |
4 |
| ENSSSCP00005005324 |
dsrm |
PF00035 |
1.3e-38 |
1 |
| ENSSSCP00005005324 |
dsrm |
PF00035 |
1.3e-38 |
2 |
| ENSSSCP00005005324 |
Staufen_C |
PF16482 |
9.4e-19 |
3 |
| ENSSSCP00005005675 |
dsrm |
PF00035 |
2.5e-36 |
1 |
| ENSSSCP00005005675 |
dsrm |
PF00035 |
2.5e-36 |
2 |
| ENSSSCP00005005675 |
dsrm |
PF00035 |
2.5e-36 |
3 |
| ENSSSCP00005005675 |
Staufen_C |
PF16482 |
4.1e-19 |
4 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| STAU2-201 |
ENSSSCT00005008991 |
2682 |
538aa |
ENSSSCP00005005324 |
| STAU2-202 |
ENSSSCT00005009011 |
2869 |
576aa |
ENSSSCP00005005336 |
| STAU2-203 |
ENSSSCT00005009133 |
3131 |
627aa |
ENSSSCP00005005411 |
| STAU2-204 |
ENSSSCT00005009275 |
4653 |
479aa |
ENSSSCP00005005509 |
| STAU2-208 |
ENSSSCT00005009290 |
2925 |
608aa |
ENSSSCP00005005520 |
| STAU2-207 |
ENSSSCT00005009316 |
2942 |
594aa |
ENSSSCP00005005532 |
| STAU2-206 |
ENSSSCT00005009335 |
2896 |
570aa |
ENSSSCP00005005547 |
| STAU2-205 |
ENSSSCT00005009355 |
3172 |
479aa |
ENSSSCP00005005557 |
| STAU2-209 |
ENSSSCT00005009403 |
1896 |
631aa |
ENSSSCP00005005580 |
| STAU2-210 |
ENSSSCT00005009560 |
1404 |
467aa |
ENSSSCP00005005675 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005039862 | 5.27449 | 2.04521 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 7.76545 | 3.01109 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005038365 | 19.2374 | 8.4922 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 17.5911 | 7.76545 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005043601 | 33.8658 | 20.4473 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 16.7987 | 10.1426 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005039183 | 7.29927 | 3.64964 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 1.58479 | 0.792393 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005039141 | 16.3885 | 8.34598 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 17.1157 | 8.71632 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005034213 | 7.14286 | 2.82738 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 7.60697 | 3.01109 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005027930 | 14.8893 | 6.43863 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 11.7274 | 5.07132 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005011835 | 31.1475 | 18.8525 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 18.0666 | 10.935 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005013693 | 17.8102 | 9.63504 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 19.3344 | 10.4596 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005029613 | 61.1354 | 48.3261 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 66.561 | 52.6149 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005007316 | 12.949 | 5.48204 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 21.7116 | 9.19176 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005015825 | 13.2812 | 5.20833 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 8.08241 | 3.16957 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005006142 | 18.3604 | 8.96669 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 34.0729 | 16.6403 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005006314 | 14.8148 | 4.16667 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 5.07132 | 1.42631 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005735 | 20.4586 | 11.6402 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 18.3835 | 10.4596 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 99.0491 | 97.9398 | sus_scrofa_berkshire | ENSSSCP00065007336 | 98.8924 | 97.7848 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 99.0491 | 97.9398 | sus_scrofa | ENSSSCP00000039405 | 98.8924 | 97.7848 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 99.0491 | 97.9398 | sus_scrofa_bamei | ENSSSCP00050025440 | 98.8924 | 97.7848 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 99.0491 | 97.9398 | sus_scrofa_rongchang | ENSSSCP00030027660 | 98.8924 | 97.7848 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 99.0491 | 97.9398 | sus_scrofa_landrace | ENSSSCP00045014054 | 98.8924 | 97.7848 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 97.6228 | 95.2456 | equus_caballus | ENSECAP00000054411 | 98.4026 | 96.0064 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 99.0491 | 97.9398 | sus_scrofa_meishan | ENSSSCP00040041535 | 98.8924 | 97.7848 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 94.9287 | 94.1363 | bos_taurus | ENSBTAP00000066503 | 98.5197 | 97.6974 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 99.0491 | 97.9398 | sus_scrofa_hampshire | ENSSSCP00035017860 | 98.8924 | 97.7848 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 99.0491 | 97.9398 | sus_scrofa_jinhua | ENSSSCP00060012438 | 98.8924 | 97.7848 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 99.0491 | 97.9398 | sus_scrofa_largewhite | ENSSSCP00025032178 | 98.8924 | 97.7848 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 98.7322 | 97.6228 | sus_scrofa_pietrain | ENSSSCP00055041822 | 99.362 | 98.2456 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 98.7322 | 97.6228 | sus_scrofa_usmarc | ENSSSCP00070029699 | 99.362 | 98.2456 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 98.7322 | 97.6228 | sus_scrofa_tibetan | ENSSSCP00015031265 | 99.362 | 98.2456 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 97.7813 | 95.7211 | ovis_aries_rambouillet | ENSOARP00020016781 | 95.6589 | 93.6434 |
| ENSSSCG00005005936 | sus_scrofa_wuzhishan | ENSSSCP00005005580 | 17.4326 | 16.9572 | ovis_aries_rambouillet | ENSOARP00020018085 | 92.437 | 89.916 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
