Description

Ensembl ID ENSSSCG00005005056 Gene ID 100415809 Accession -
Symbol Alias - Full Name spermatogenesis associated serine rich 2 like
Status Confidence Length 182650 bases Strand Minus strand
Position KQ003174.1 : 2859569 - 3042218 RNA binding domain DUF1387
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00005004669 DUF1387 PF07139 4e-135 1
ENSSSCP00005004569 DUF1387 PF07139 4.1e-135 1
ENSSSCP00005004588 DUF1387 PF07139 4.1e-135 1
ENSSSCP00005004610 DUF1387 PF07139 4.1e-135 1
ENSSSCP00005004435 DUF1387 PF07139 9.1e-112 1
ENSSSCP00005004435 DUF1387 PF07139 9.1e-112 2
ENSSSCP00005004422 DUF1387 PF07139 1e-111 1
ENSSSCP00005004422 DUF1387 PF07139 1e-111 2
ENSSSCP00005004579 DUF1387 PF07139 1e-111 1
ENSSSCP00005004579 DUF1387 PF07139 1e-111 2
ENSSSCP00005004506 DUF1387 PF07139 1.5e-111 1
ENSSSCP00005004506 DUF1387 PF07139 1.5e-111 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSSCT00005007613 2132 503aa ENSSSCP00005004422
- ENSSSCT00005007637 2059 490aa ENSSSCP00005004435
- ENSSSCT00005007789 2841 548aa ENSSSCP00005004506
- ENSSSCT00005007871 2579 559aa ENSSSCP00005004569
- ENSSSCT00005007887 2128 503aa ENSSSCP00005004579
- ENSSSCT00005007896 2332 559aa ENSSSCP00005004588
- ENSSSCT00005007928 2556 559aa ENSSSCP00005004610
- ENSSSCT00005008042 1665 554aa ENSSSCP00005004669

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500320855.128239.7436sus_scrofa_wuzhishanENSSSCP0000500456953.846238.8193

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.821199.8211sus_scrofa_berkshireENSSSCP0006501311390.437690.4376
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.821199.8211sus_scrofaENSSSCP0000006589690.437690.4376
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.642299.6422sus_scrofa_bameiENSSSCP0005004214990.275590.2755
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.284499.2844sus_scrofa_rongchangENSSSCP0003001240189.951489.9514
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.821199.8211sus_scrofa_landraceENSSSCP0004502259790.437690.4376
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456994.991191.9499equus_caballusENSECAP0000004927686.341583.5772
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.642299.6422sus_scrofa_meishanENSSSCP0004002059890.275590.2755
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456996.958994.8122bos_taurusENSBTAP0000005756588.852586.8852
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.821199.8211sus_scrofa_hampshireENSSSCP0003502034390.437690.4376
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.821199.8211sus_scrofa_jinhuaENSSSCP0006000780390.437690.4376
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.821199.8211sus_scrofa_largewhiteENSSSCP0002504889690.437690.4376
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.821199.8211sus_scrofa_pietrainENSSSCP0005501288190.437690.4376
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456999.821199.8211sus_scrofa_usmarcENSSSCP0007003943690.437690.4376
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456998.211197.8533sus_scrofa_tibetanENSSSCP0001502994196.147195.7968
ENSSSCG00005005056sus_scrofa_wuzhishanENSSSCP0000500456997.137794.6333ovis_aries_rambouilletENSOARP0002001854095.936493.4629

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression