Description

Ensembl ID ENSSSCG00005003771 Gene ID Accession -
Symbol SPATS2 Alias - Full Name NA
Status Confidence Length 105797 bases Strand Plus strand
Position KQ002712.1 : 4315037 - 4420833 RNA binding domain DUF1387
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSCP00005003208 DUF1387 PF07139 1.3e-130 1
ENSSSCP00005003233 DUF1387 PF07139 3.1e-58 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SPATS2-201 ENSSSCT00005005573 4232 546aa ENSSSCP00005003208
SPATS2-202 ENSSSCT00005005604 2802 286aa ENSSSCP00005003233

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500456953.846238.8193sus_scrofa_wuzhishanENSSSCP0000500320855.128239.7436

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320899.633799.6337sus_scrofa_berkshireENSSSCP0006503467099.633799.6337
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320899.816899.8168sus_scrofaENSSSCP0000007358399.816899.8168
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320899.816899.8168sus_scrofa_bameiENSSSCP0005004749399.816899.8168
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320899.816899.8168sus_scrofa_rongchangENSSSCP0003003381499.816899.8168
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320899.633799.6337sus_scrofa_landraceENSSSCP0004501008399.633799.6337
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320890.659388.8278equus_caballusENSECAP0000000418690.659388.8278
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320899.816899.8168sus_scrofa_meishanENSSSCP0004001666199.816899.8168
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320865.384661.3553bos_taurusENSBTAP0000005121394.195388.3905
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320896.33792.8571bos_taurusENSBTAP0000000611696.33792.8571
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320899.816899.8168sus_scrofa_hampshireENSSSCP0003503934299.816899.8168
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320899.816899.8168sus_scrofa_jinhuaENSSSCP0006001220999.816899.8168
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320899.816899.8168sus_scrofa_largewhiteENSSSCP0002504633299.816899.8168
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP00005003208100100sus_scrofa_pietrainENSSSCP00055041000100100
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP00005003208100100sus_scrofa_usmarcENSSSCP00070052278100100
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP00005003208100100sus_scrofa_tibetanENSSSCP00015044733100100
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320896.33792.8571ovis_aries_rambouilletENSOARP0002000089096.33792.8571
ENSSSCG00005003771sus_scrofa_wuzhishanENSSSCP0000500320848.534845.6044ovis_aries_rambouilletENSOARP0002002970692.334586.7596

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression