RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSSSCG00005003771 | Gene ID |
|
Accession |
- |
Symbol |
SPATS2 |
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
105797 bases |
Strand |
Plus strand |
Position |
KQ002712.1 : 4315037 - 4420833 |
RNA binding domain |
DUF1387 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSSSCP00005003208 |
DUF1387 |
PF07139 |
1.3e-130 |
1 |
ENSSSCP00005003233 |
DUF1387 |
PF07139 |
3.1e-58 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
SPATS2-201 |
ENSSSCT00005005573 |
4232 |
546aa |
ENSSSCP00005003208 |
SPATS2-202 |
ENSSSCT00005005604 |
2802 |
286aa |
ENSSSCP00005003233 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005004569 | 53.8462 | 38.8193 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 55.1282 | 39.7436 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 99.6337 | 99.6337 | sus_scrofa_berkshire | ENSSSCP00065034670 | 99.6337 | 99.6337 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 99.8168 | 99.8168 | sus_scrofa | ENSSSCP00000073583 | 99.8168 | 99.8168 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 99.8168 | 99.8168 | sus_scrofa_bamei | ENSSSCP00050047493 | 99.8168 | 99.8168 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 99.8168 | 99.8168 | sus_scrofa_rongchang | ENSSSCP00030033814 | 99.8168 | 99.8168 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 99.6337 | 99.6337 | sus_scrofa_landrace | ENSSSCP00045010083 | 99.6337 | 99.6337 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 90.6593 | 88.8278 | equus_caballus | ENSECAP00000004186 | 90.6593 | 88.8278 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 99.8168 | 99.8168 | sus_scrofa_meishan | ENSSSCP00040016661 | 99.8168 | 99.8168 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 65.3846 | 61.3553 | bos_taurus | ENSBTAP00000051213 | 94.1953 | 88.3905 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 96.337 | 92.8571 | bos_taurus | ENSBTAP00000006116 | 96.337 | 92.8571 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 99.8168 | 99.8168 | sus_scrofa_hampshire | ENSSSCP00035039342 | 99.8168 | 99.8168 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 99.8168 | 99.8168 | sus_scrofa_jinhua | ENSSSCP00060012209 | 99.8168 | 99.8168 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 99.8168 | 99.8168 | sus_scrofa_largewhite | ENSSSCP00025046332 | 99.8168 | 99.8168 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 100 | 100 | sus_scrofa_pietrain | ENSSSCP00055041000 | 100 | 100 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 100 | 100 | sus_scrofa_usmarc | ENSSSCP00070052278 | 100 | 100 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 100 | 100 | sus_scrofa_tibetan | ENSSSCP00015044733 | 100 | 100 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 96.337 | 92.8571 | ovis_aries_rambouillet | ENSOARP00020000890 | 96.337 | 92.8571 |
ENSSSCG00005003771 | sus_scrofa_wuzhishan | ENSSSCP00005003208 | 48.5348 | 45.6044 | ovis_aries_rambouillet | ENSOARP00020029706 | 92.3345 | 86.7596 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |