Description

Ensembl ID ENSSSAG00000003015 Gene ID 100380529 Accession -
Symbol trmt1 Alias - Full Name tRNA methyltransferase 1
Status Confidence Length 14203 bases Strand Minus strand
Position 12 : 20744997 - 20759199 RNA binding domain TRM
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSSAP00000167306 TRM PF02005 5.4e-139 1
ENSSSAP00000122877 TRM PF02005 6.4e-139 1
ENSSSAP00000124781 TRM PF02005 6.5e-139 1
ENSSSAP00000129909 TRM PF02005 8.4e-139 1
ENSSSAP00000173866 TRM PF02005 9.2e-139 1
ENSSSAP00000006019 TRM PF02005 1.2e-138 1
ENSSSAP00000157335 TRM PF02005 7e-138 1
ENSSSAP00000150769 TRM PF02005 9.3e-130 1
ENSSSAP00000176295 TRM PF02005 3.5e-110 1
ENSSSAP00000176295 TRM PF02005 3.5e-110 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
trmt1-209 ENSSSAT00000208101 1623 540aa ENSSSAP00000167306
trmt1-208 ENSSSAT00000235805 2061 568aa ENSSSAP00000122877
trmt1-203 ENSSSAT00000238485 1722 573aa ENSSSAP00000124781
trmt1-204 ENSSSAT00000250269 1473 490aa ENSSSAP00000176295
trmt1-205 ENSSSAT00000235357 1872 623aa ENSSSAP00000129909
trmt1-206 ENSSSAT00000157044 2187 640aa ENSSSAP00000173866
trmt1-207 ENSSSAT00000209770 2103 612aa ENSSSAP00000150769
trmt1-201 ENSSSAT00000006442 2604 692aa ENSSSAP00000006019
trmt1-202 ENSSSAT00000245531 2563 629aa ENSSSAP00000157335

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSAG00000003015

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSSAG00000003015

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression