Description

Ensembl ID ENSSRHG00000048311 Gene ID 107755569 Accession -
Symbol Alias - Full Name probable ATP-dependent RNA helicase DHX58
Status Confidence Length 9185 bases Strand Plus strand
Position LAVF01S019001.1 : 197481 - 206665 RNA binding domain ResIII , DEAD , RIG-I_C , RIG-I_C-RD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSRHP00000098339 ResIII PF04851 9.9e-20 1
ENSSRHP00000098339 DEAD PF00270 8.5e-16 2
ENSSRHP00000098339 RIG-I_C PF18119 2.5e-31 3
ENSSRHP00000098339 RIG-I_C-RD PF11648 9.6e-34 4
ENSSRHP00000098344 ResIII PF04851 1e-19 1
ENSSRHP00000098344 DEAD PF00270 7.4e-16 2
ENSSRHP00000098344 RIG-I_C PF18119 2.8e-24 3
ENSSRHP00000098344 RIG-I_C-RD PF11648 9.1e-34 4
ENSSRHP00000098341 ResIII PF04851 1e-19 1
ENSSRHP00000098341 DEAD PF00270 7.9e-16 2
ENSSRHP00000098341 RIG-I_C PF18119 2.4e-31 3
ENSSRHP00000098341 RIG-I_C-RD PF11648 9.2e-34 4
ENSSRHP00000098346 ResIII PF04851 1.1e-19 1
ENSSRHP00000098346 DEAD PF00270 8e-16 2
ENSSRHP00000098346 RIG-I_C PF18119 5.6e-28 3
ENSSRHP00000098346 RIG-I_C-RD PF11648 9.3e-34 4
ENSSRHP00000098349 ResIII PF04851 1.1e-19 1
ENSSRHP00000098349 DEAD PF00270 8.2e-16 2
ENSSRHP00000098349 RIG-I_C PF18119 2.2e-31 3
ENSSRHP00000098349 RIG-I_C-RD PF11648 9.2e-34 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSRHT00000101015 2923 699aa ENSSRHP00000098339
- ENSSRHT00000101017 2043 680aa ENSSRHP00000098341
- ENSSRHT00000101020 2025 674aa ENSSRHP00000098344
- ENSSRHT00000101022 2055 684aa ENSSRHP00000098346
- ENSSRHT00000101025 2043 680aa ENSSRHP00000098349

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000048311

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000048311

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression