Description

Ensembl ID ENSSRHG00000040574 Gene ID 107727068 Accession -
Symbol Alias - Full Name fragile X mental retardation syndrome-related protein 1-like
Status Confidence Length 11579 bases Strand Minus strand
Position LAVF01S038936.1 : 406906 - 418484 RNA binding domain FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSRHP00000082000 FXR_C1 PF16096 3e-37 1
ENSSRHP00000082000 KH_1 PF00013 4.6e-18 2
ENSSRHP00000082000 KH_1 PF00013 4.6e-18 3
ENSSRHP00000082000 KH_9 PF17904 1.1e-22 4
ENSSRHP00000082000 FXMRP1_C_core PF12235 1.1e-33 5
ENSSRHP00000082000 FXMRP1_C_core PF12235 1.1e-33 6
ENSSRHP00000081985 FXR_C1 PF16096 3.1e-37 1
ENSSRHP00000081985 KH_1 PF00013 4.7e-18 2
ENSSRHP00000081985 KH_1 PF00013 4.7e-18 3
ENSSRHP00000081985 KH_9 PF17904 5.7e-23 4
ENSSRHP00000081985 FXMRP1_C_core PF12235 3.4e-50 5
ENSSRHP00000081982 FXR_C1 PF16096 3.2e-37 1
ENSSRHP00000081982 KH_1 PF00013 6.1e-18 2
ENSSRHP00000081982 KH_1 PF00013 6.1e-18 3
ENSSRHP00000081982 KH_9 PF17904 1.2e-22 4
ENSSRHP00000081982 FXMRP1_C_core PF12235 4.1e-50 5
ENSSRHP00000081981 FXR_C1 PF16096 3.3e-37 1
ENSSRHP00000081981 KH_1 PF00013 6.5e-18 2
ENSSRHP00000081981 KH_1 PF00013 6.5e-18 3
ENSSRHP00000081981 KH_9 PF17904 1.2e-22 4
ENSSRHP00000081981 FXMRP1_C_core PF12235 4.3e-50 5
ENSSRHP00000081983 FXR_C1 PF16096 3.6e-37 1
ENSSRHP00000081983 KH_1 PF00013 6.2e-18 2
ENSSRHP00000081983 KH_1 PF00013 6.2e-18 3
ENSSRHP00000081983 KH_9 PF17904 1.4e-22 4
ENSSRHP00000081983 FXMRP1_C_core PF12235 4.1e-50 5
ENSSRHP00000081984 FXR_C1 PF16096 8.2e-37 1
ENSSRHP00000081984 KH_1 PF00013 5.1e-18 2
ENSSRHP00000081984 KH_1 PF00013 5.1e-18 3
ENSSRHP00000081984 KH_9 PF17904 6.1e-23 4
ENSSRHP00000081984 FXMRP1_C_core PF12235 3.6e-50 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSRHT00000084200 1551 516aa ENSSRHP00000081981
- ENSSRHT00000084201 1521 506aa ENSSRHP00000081982
- ENSSRHT00000084202 1518 505aa ENSSRHP00000081983
- ENSSRHT00000084203 1416 471aa ENSSRHP00000081984
- ENSSRHT00000084204 1380 459aa ENSSRHP00000081985
- ENSSRHT00000084219 1350 449aa ENSSRHP00000082000

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000040574

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000040574

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression