Description

Ensembl ID ENSSRHG00000039933 Gene ID 107711735 Accession -
Symbol Alias - Full Name CCR4-NOT transcription complex subunit 3-like
Status Confidence Length 10358 bases Strand Minus strand
Position LAVF01S027274.1 : 45759 - 56116 RNA binding domain Not3 , NOT2_3_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSRHP00000080750 Not3 PF04065 5.3e-95 1
ENSSRHP00000080750 NOT2_3_5 PF04153 9.2e-39 2
ENSSRHP00000080749 Not3 PF04065 6e-95 1
ENSSRHP00000080749 NOT2_3_5 PF04153 1e-38 2
ENSSRHP00000080740 Not3 PF04065 7.5e-95 1
ENSSRHP00000080740 NOT2_3_5 PF04153 1.2e-38 2
ENSSRHP00000080739 Not3 PF04065 7.7e-95 1
ENSSRHP00000080739 NOT2_3_5 PF04153 1.1e-38 2
ENSSRHP00000080737 Not3 PF04065 9.2e-95 1
ENSSRHP00000080737 NOT2_3_5 PF04153 1.5e-38 2
ENSSRHP00000080710 Not3 PF04065 1.1e-94 1
ENSSRHP00000080710 NOT2_3_5 PF04153 1.3e-38 2
ENSSRHP00000080733 Not3 PF04065 1.2e-94 1
ENSSRHP00000080733 NOT2_3_5 PF04153 2.1e-38 2
ENSSRHP00000080755 Not3 PF04065 1.5e-94 1
ENSSRHP00000080755 NOT2_3_5 PF04153 1.9e-08 2
ENSSRHP00000080584 Not3 PF04065 1.7e-94 1
ENSSRHP00000080584 NOT2_3_5 PF04153 1e-20 2
ENSSRHP00000080679 Not3 PF04065 1.8e-94 1
ENSSRHP00000080679 NOT2_3_5 PF04153 2.3e-38 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSRHT00000082767 2631 876aa ENSSRHP00000080584
- ENSSRHT00000082862 4250 893aa ENSSRHP00000080679
- ENSSRHT00000082893 2151 716aa ENSSRHP00000080710
- ENSSRHT00000082916 2124 707aa ENSSRHP00000080733
- ENSSRHT00000082920 1905 634aa ENSSRHP00000080737
- ENSSRHT00000082922 1791 596aa ENSSRHP00000080739
- ENSSRHT00000082923 1743 580aa ENSSRHP00000080740
- ENSSRHT00000082932 1578 525aa ENSSRHP00000080749
- ENSSRHT00000082933 1491 496aa ENSSRHP00000080750
- ENSSRHT00000082938 2373 790aa ENSSRHP00000080755

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000039933

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000039933

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression