Description

Ensembl ID ENSSRHG00000038063 Gene ID 107753958 Accession -
Symbol Alias - Full Name fragile X mental retardation syndrome-related protein 1-like
Status Confidence Length 35307 bases Strand Minus strand
Position LAVF01S017966.1 : 1021902 - 1057208 RNA binding domain Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSRHP00000081390 Agenet PF05641 8.9e-15 1
ENSSRHP00000081390 FXR_C1 PF16096 1.8e-21 2
ENSSRHP00000081390 KH_1 PF00013 2.3e-15 3
ENSSRHP00000081390 KH_1 PF00013 2.3e-15 4
ENSSRHP00000081390 KH_9 PF17904 9.9e-32 5
ENSSRHP00000081390 FXMRP1_C_core PF12235 3.1e-33 6
ENSSRHP00000081386 Agenet PF05641 1e-14 1
ENSSRHP00000081386 FXR_C1 PF16096 2.1e-21 2
ENSSRHP00000081386 KH_1 PF00013 2.8e-15 3
ENSSRHP00000081386 KH_1 PF00013 2.8e-15 4
ENSSRHP00000081386 KH_9 PF17904 1.1e-31 5
ENSSRHP00000081386 FXMRP1_C_core PF12235 3.3e-33 6
ENSSRHP00000081387 Agenet PF05641 1e-14 1
ENSSRHP00000081387 FXR_C1 PF16096 2.1e-21 2
ENSSRHP00000081387 KH_1 PF00013 2.8e-15 3
ENSSRHP00000081387 KH_1 PF00013 2.8e-15 4
ENSSRHP00000081387 KH_9 PF17904 1.1e-31 5
ENSSRHP00000081387 FXMRP1_C_core PF12235 3.3e-33 6
ENSSRHP00000081600 Agenet PF05641 1.8e-10 1
ENSSRHP00000081600 FXR_C1 PF16096 1.6e-21 2
ENSSRHP00000081600 KH_1 PF00013 3e-18 3
ENSSRHP00000081600 KH_1 PF00013 3e-18 4
ENSSRHP00000081600 KH_9 PF17904 9.2e-32 5
ENSSRHP00000081600 FXMRP1_C_core PF12235 2.1e-33 6
ENSSRHP00000081395 Agenet PF05641 3.3e-10 1
ENSSRHP00000081395 FXR_C1 PF16096 2e-21 2
ENSSRHP00000081395 KH_1 PF00013 2.8e-15 3
ENSSRHP00000081395 KH_1 PF00013 2.8e-15 4
ENSSRHP00000081395 KH_9 PF17904 1.1e-31 5
ENSSRHP00000081395 FXMRP1_C_core PF12235 3.2e-33 6
ENSSRHP00000081648 Agenet PF05641 3.7e-10 1
ENSSRHP00000081648 KH_1 PF00013 1.3e-05 2
ENSSRHP00000081648 KH_9 PF17904 2.8e-32 3
ENSSRHP00000081591 Agenet PF05641 2.5e-09 1
ENSSRHP00000081591 FXR_C1 PF16096 2.7e-20 2
ENSSRHP00000081591 KH_1 PF00013 3.1e-18 3
ENSSRHP00000081591 KH_1 PF00013 3.1e-18 4
ENSSRHP00000081591 KH_9 PF17904 7.5e-32 5
ENSSRHP00000081591 FXMRP1_C_core PF12235 5.5e-25 6
ENSSRHP00000081588 Agenet PF05641 2.9e-09 1
ENSSRHP00000081588 FXR_C1 PF16096 1.7e-21 2
ENSSRHP00000081588 KH_1 PF00013 3.5e-18 3
ENSSRHP00000081588 KH_1 PF00013 3.5e-18 4
ENSSRHP00000081588 KH_9 PF17904 8.3e-32 5
ENSSRHP00000081588 FXMRP1_C_core PF12235 2.8e-33 6
ENSSRHP00000081574 Agenet PF05641 8.4e-09 1
ENSSRHP00000081574 FXR_C1 PF16096 4.3e-20 2
ENSSRHP00000081574 KH_1 PF00013 2.4e-18 3
ENSSRHP00000081574 KH_1 PF00013 2.4e-18 4
ENSSRHP00000081574 KH_9 PF17904 7.9e-32 5
ENSSRHP00000081574 FXMRP1_C_core PF12235 4.7e-25 6
ENSSRHP00000081396 Agenet PF05641 1.2e-08 1
ENSSRHP00000081396 FXR_C1 PF16096 2e-21 2
ENSSRHP00000081396 KH_1 PF00013 2.6e-15 3
ENSSRHP00000081396 KH_1 PF00013 2.6e-15 4
ENSSRHP00000081396 KH_9 PF17904 1e-31 5
ENSSRHP00000081396 FXMRP1_C_core PF12235 3.6e-33 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSRHT00000083594 5327 677aa ENSSRHP00000081386
- ENSSRHT00000083595 5235 677aa ENSSRHP00000081387
- ENSSRHT00000083598 5228 644aa ENSSRHP00000081390
- ENSSRHT00000083604 2010 669aa ENSSRHP00000081395
- ENSSRHT00000083605 1950 649aa ENSSRHP00000081396
- ENSSRHT00000083784 1533 510aa ENSSRHP00000081574
- ENSSRHT00000083799 1791 596aa ENSSRHP00000081588
- ENSSRHT00000083802 1698 565aa ENSSRHP00000081591
- ENSSRHT00000083811 1677 558aa ENSSRHP00000081600
- ENSSRHT00000083860 852 283aa ENSSRHP00000081648

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000038063

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000038063

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression