RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSRHG00000032246	Gene ID	107731469	Accession	-
Symbol		Alias	-	Full Name	phenylalanine--tRNA ligase alpha subunit-like
Status	Confidence	Length	12264 bases	Strand	Minus strand
Position	LAVF01S042745.1 : 62890 - 75153	RNA binding domain	PheRS_DBD1 , tRNA-synt_2d
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSRHP00000064723	PheRS_DBD1	PF18552	2.4e-22	1
ENSSRHP00000064723	tRNA-synt_2d	PF01409	1.2e-90	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSRHT00000066510	1416	471aa	ENSSRHP00000064723

Gene Model

Click here to download ENSSRHG00000032246's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSRHG00000032246's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSRHG00000032246

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSRHG00000032246

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression