Description

Ensembl ID ENSSRHG00000019150 Gene ID 107750766 Accession -
Symbol Alias - Full Name fragile X mental retardation syndrome-related protein 1-like
Status Confidence Length 20996 bases Strand Minus strand
Position LAVF01S015928.1 : 170834 - 191829 RNA binding domain Agenet , FXR_C1 , KH_1 , KH_9 , FXMRP1_C_core
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSRHP00000040582 Agenet PF05641 7.9e-14 1
ENSSRHP00000040582 FXR_C1 PF16096 1.4e-20 2
ENSSRHP00000040582 KH_1 PF00013 2.5e-15 3
ENSSRHP00000040582 KH_1 PF00013 2.5e-15 4
ENSSRHP00000040582 KH_9 PF17904 7.6e-32 5
ENSSRHP00000040582 FXMRP1_C_core PF12235 3.4e-34 6
ENSSRHP00000040581 Agenet PF05641 9.4e-14 1
ENSSRHP00000040581 FXR_C1 PF16096 1e-20 2
ENSSRHP00000040581 KH_1 PF00013 3.1e-15 3
ENSSRHP00000040581 KH_1 PF00013 3.1e-15 4
ENSSRHP00000040581 KH_9 PF17904 8.4e-32 5
ENSSRHP00000040581 FXMRP1_C_core PF12235 9.2e-35 6
ENSSRHP00000040958 Agenet PF05641 2.6e-08 1
ENSSRHP00000040958 KH_1 PF00013 3.2e-18 2
ENSSRHP00000040958 KH_1 PF00013 3.2e-18 3
ENSSRHP00000040958 KH_9 PF17904 5e-32 4
ENSSRHP00000040958 FXMRP1_C_core PF12235 1.4e-33 5
ENSSRHP00000041036 Agenet PF05641 2.7e-08 1
ENSSRHP00000041036 KH_1 PF00013 2.2e-15 2
ENSSRHP00000041036 KH_1 PF00013 2.2e-15 3
ENSSRHP00000041036 KH_9 PF17904 4.4e-32 4
ENSSRHP00000041036 FXMRP1_C_core PF12235 1.4e-25 5
ENSSRHP00000040766 Agenet PF05641 3.3e-08 1
ENSSRHP00000040766 FXR_C1 PF16096 1.1e-20 2
ENSSRHP00000040766 KH_1 PF00013 1.6e-17 3
ENSSRHP00000040766 KH_1 PF00013 1.6e-17 4
ENSSRHP00000040766 KH_9 PF17904 5.8e-32 5
ENSSRHP00000040766 FXMRP1_C_core PF12235 6.7e-23 6
ENSSRHP00000040701 Agenet PF05641 3.8e-08 1
ENSSRHP00000040701 FXR_C1 PF16096 1.2e-20 2
ENSSRHP00000040701 KH_1 PF00013 2.1e-17 3
ENSSRHP00000040701 KH_1 PF00013 2.1e-17 4
ENSSRHP00000040701 KH_9 PF17904 6.8e-32 5
ENSSRHP00000040701 FXMRP1_C_core PF12235 2.1e-34 6
ENSSRHP00000040705 Agenet PF05641 3.9e-08 1
ENSSRHP00000040705 FXR_C1 PF16096 1.3e-20 2
ENSSRHP00000040705 KH_1 PF00013 1.9e-15 3
ENSSRHP00000040705 KH_1 PF00013 1.9e-15 4
ENSSRHP00000040705 KH_9 PF17904 6.3e-32 5
ENSSRHP00000040705 FXMRP1_C_core PF12235 3.7e-35 6
ENSSRHP00000040703 Agenet PF05641 4.1e-08 1
ENSSRHP00000040703 FXR_C1 PF16096 1.2e-20 2
ENSSRHP00000040703 KH_1 PF00013 2.4e-17 3
ENSSRHP00000040703 KH_1 PF00013 2.4e-17 4
ENSSRHP00000040703 KH_9 PF17904 6.9e-32 5
ENSSRHP00000040703 FXMRP1_C_core PF12235 2.6e-34 6
ENSSRHP00000040586 Agenet PF05641 4.8e-08 1
ENSSRHP00000040586 FXR_C1 PF16096 9.7e-21 2
ENSSRHP00000040586 KH_1 PF00013 2.6e-15 3
ENSSRHP00000040586 KH_1 PF00013 2.6e-15 4
ENSSRHP00000040586 KH_9 PF17904 7.9e-32 5
ENSSRHP00000040586 FXMRP1_C_core PF12235 2.8e-34 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSRHT00000041745 4133 677aa ENSSRHP00000040581
- ENSSRHT00000041746 4034 644aa ENSSRHP00000040582
- ENSSRHT00000041750 1953 650aa ENSSRHP00000040586
- ENSSRHT00000041868 1650 549aa ENSSRHP00000040701
- ENSSRHT00000041870 1740 579aa ENSSRHP00000040703
- ENSSRHT00000041872 1674 557aa ENSSRHP00000040705
- ENSSRHT00000041934 1500 499aa ENSSRHP00000040766
- ENSSRHT00000042128 1413 470aa ENSSRHP00000040958
- ENSSRHT00000042208 1293 430aa ENSSRHP00000041036

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000019150

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000019150

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression