Description

Ensembl ID ENSSRHG00000001688 Gene ID 107739521 Accession -
Symbol Alias - Full Name CCR4-NOT transcription complex subunit 3-like
Status Confidence Length 29193 bases Strand Minus strand
Position LAVF01S006967.1 : 1130954 - 1160146 RNA binding domain Not3 , NOT2_3_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSRHP00000005257 Not3 PF04065 3.3e-95 1
ENSSRHP00000005257 NOT2_3_5 PF04153 4.5e-38 2
ENSSRHP00000005253 Not3 PF04065 3.9e-95 1
ENSSRHP00000005253 NOT2_3_5 PF04153 1.5e-38 2
ENSSRHP00000005337 Not3 PF04065 4e-95 1
ENSSRHP00000005337 NOT2_3_5 PF04153 8.8e-08 2
ENSSRHP00000005168 Not3 PF04065 4.3e-95 1
ENSSRHP00000005168 NOT2_3_5 PF04153 1.1e-38 2
ENSSRHP00000005223 Not3 PF04065 4.4e-95 1
ENSSRHP00000005223 NOT2_3_5 PF04153 5.3e-38 2
ENSSRHP00000005079 Not3 PF04065 7.3e-95 1
ENSSRHP00000005079 NOT2_3_5 PF04153 2.9e-38 2
ENSSRHP00000005023 Not3 PF04065 9.2e-95 1
ENSSRHP00000005023 NOT2_3_5 PF04153 3.1e-38 2
ENSSRHP00000005267 Not3 PF04065 9.3e-95 1
ENSSRHP00000005267 NOT2_3_5 PF04153 6.8e-27 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSRHT00000005213 3044 889aa ENSSRHP00000005023
- ENSSRHT00000005273 2136 711aa ENSSRHP00000005079
- ENSSRHT00000005368 1740 579aa ENSSRHP00000005168
- ENSSRHT00000005424 1710 569aa ENSSRHP00000005223
- ENSSRHT00000005455 1620 539aa ENSSRHP00000005253
- ENSSRHT00000005460 1563 520aa ENSSRHP00000005257
- ENSSRHT00000005469 2670 889aa ENSSRHP00000005267
- ENSSRHT00000005540 1650 549aa ENSSRHP00000005337

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000001688

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSRHG00000001688

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression