RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSSPUG00000009044	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	44912 bases	Strand	Minus strand
Position	QEPC01001969.1 : 1226509 - 1271420	RNA binding domain	APOBEC_N , APOBEC_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSPUP00000011780	APOBEC_N	PF08210	2.6e-27	1
ENSSPUP00000011780	APOBEC_C	PF05240	3.4e-16	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSPUT00000012567	1328	260aa	ENSSPUP00000011780

Gene Model

Click here to download ENSSPUG00000009044's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSPUG00000009044's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011771	35.533	26.3959	sphenodon_punctatus	ENSSPUP00000011780	26.9231	20
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000014053	33.1731	18.75	sphenodon_punctatus	ENSSPUP00000011780	26.5385	15

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	51.9231	39.2308	chrysemys_picta_bellii	ENSCPBP00000019922	54.6559	41.2955
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.3846	34.2308	crocodylus_porosus	ENSCPRP00005000897	54.1284	40.8257
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	50	36.1538	notamacropus_eugenii	ENSMEUP00000012226	55.0847	39.8305
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.7692	36.5385	mus_musculus	ENSMUSP00000108205	51.9651	41.4847
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	26.5385	20.3846	mus_pahari	MGP_PahariEiJ_P0052190	57.0248	43.8017
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	41.5385	29.6154	parus_major	ENSPMJP00000004098	50.4673	35.9813
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	34.6154	macaca_mulatta	ENSMMUP00000077099	50.8475	38.1356
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.3077	34.2308	mustela_putorius_furo	ENSMPUP00000017420	52.1186	37.7119
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	33.0769	erinaceus_europaeus	ENSEEUP00000008288	53.7778	38.2222
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	37.3077	26.5385	erinaceus_europaeus	ENSEEUP00000006837	46.1905	32.8571
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	38.0769	27.6923	ochotona_princeps	ENSOPRP00000008688	55.618	40.4494
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	36.1538	marmota_marmota_marmota	ENSMMMP00000015806	52.6087	40.8696
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.0769	35.7692	ailuropoda_melanoleuca	ENSAMEP00000007480	53.1915	39.5745
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	35.3846	oryctolagus_cuniculus	ENSOCUP00000021115	44.9438	34.4569
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.8462	36.5385	felis_catus	ENSFCAP00000008672	53.8136	40.2542
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	19.2308	14.6154	choloepus_hoffmanni	ENSCHOP00000002084	40.9836	31.1475
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	36.5385	equus_asinus	ENSEASP00005023436	51.2712	40.2542
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.9231	35.7692	balaenoptera_musculus	ENSBMSP00010025967	51.6949	39.4068
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	34.6154	cercocebus_atys	ENSCATP00000007163	48.7903	36.2903
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	34.6154	mandrillus_leucophaeus	ENSMLEP00000024284	51.2712	38.1356
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.3846	35.3846	cavia_porcellus	ENSCPOP00000027134	50	38.9831
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.4615	36.9231	dasypus_novemcinctus	ENSDNOP00000034917	53.3898	40.678
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.3846	33.0769	chinchilla_lanigera	ENSCLAP00000021384	51.3043	37.3913
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	34.6154	papio_anubis	ENSPANP00000004170	50.8475	38.1356
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.4615	33.4615	heterocephalus_glaber_female	ENSHGLP00000001968	51.8519	35.8025
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.7692	33.4615	bos_grunniens	ENSBGRP00000015546	50.4237	36.8644
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	34.6154	macaca_fascicularis	ENSMFAP00000045081	48.3871	36.2903
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	38.8462	29.2308	tursiops_truncatus	ENSTTRP00000013291	54.0107	40.6417
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	31.5385	22.6923	sorex_araneus	ENSSARP00000010805	62.5954	45.0382
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	38.4615	26.1538	sorex_araneus	ENSSARP00000000030	58.4795	39.7661
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.9231	33.8462	nomascus_leucogenys	ENSNLEP00000006471	51.6949	37.2881
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	34.6154	macaca_nemestrina	ENSMNEP00000010525	50.8475	38.1356
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.7692	33.4615	bos_indicus_hybrid	ENSBIXP00005033019	50.4237	36.8644
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	39.2308	29.6154	procavia_capensis	ENSPCAP00000008128	54.5455	41.1765
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.7692	35.3846	tupaia_belangeri	ENSTBEP00000008682	50.8547	39.3162
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.4615	33.8462	vombatus_ursinus	ENSVURP00010023113	54.7826	38.2609
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.3077	35.7692	canis_lupus_familiaris	ENSCAFP00845041217	49.7976	37.6518
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	35.3846	delphinapterus_leucas	ENSDLEP00000022479	51.4894	39.1489
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.6923	35	sus_scrofa	ENSSSCP00000000709	52.5424	38.5593
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	37.3077	28.0769	chlorocebus_sabaeus	ENSCSAP00000006063	50.7853	38.2199
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	34.2308	pan_troglodytes	ENSPTRP00000007882	51.2712	37.7119
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	24.2308	18.0769	microtus_ochrogaster	ENSMOCP00000017628	55.7522	41.5929
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	38.8462	28.4615	saimiri_boliviensis_boliviensis	ENSSBOP00000028393	57.0621	41.8079
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	50	40.7692	chelonoidis_abingdonii	ENSCABP00000017055	66.3265	54.0816
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.6923	35	vicugna_pacos	ENSVPAP00000001239	52.5424	38.5593
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	33.8462	homo_sapiens	ENSP00000229304	50.8475	37.2881
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	35.3846	physeter_catodon	ENSPCTP00005025904	51.2712	38.9831
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	42.6923	29.2308	anolis_carolinensis	ENSACAP00000036416	50.6849	34.7032
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.8462	33.0769	sarcophilus_harrisii	ENSSHAP00000010336	55.2174	37.3913
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.4615	35.7692	otolemur_garnettii	ENSOGAP00000020110	53.3898	39.4068
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	36.5385	cricetulus_griseus_chok1gshd	ENSCGRP00001008956	52.8384	41.4847
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	44.2308	32.3077	pan_paniscus	ENSPPAP00000008823	52.7523	38.5321
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	44.6154	33.0769	ornithorhynchus_anatinus	ENSOANP00000054600	44.9612	33.3333
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.8462	36.5385	panthera_pardus	ENSPPRP00000021349	53.8136	40.2542
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.7692	36.5385	mus_spretus	MGP_SPRETEiJ_P0079074	51.9651	41.4847
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	42.6923	30	anas_platyrhynchos_platyrhynchos	ENSAPLP00000023995	56.6327	39.7959
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.6923	36.1538	sciurus_vulgaris	ENSSVLP00005002210	52.5424	39.8305
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.7692	35	monodon_monoceros	ENSMMNP00015024254	50.6383	38.7234
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	43.0769	34.2308	mesocricetus_auratus	ENSMAUP00000025731	50.4505	40.0901
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.9231	35.7692	loxodonta_africana	ENSLAFP00000021422	54.7085	41.704
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	37.6923	28.8462	pteropus_vampyrus	ENSPVAP00000010090	42.0601	32.1888
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	35.7692	urocitellus_parryii	ENSUPAP00010027973	52.1739	40.4348
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.7692	33.4615	bos_taurus	ENSBTAP00000019544	50.4237	36.8644
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	36.5385	equus_caballus	ENSECAP00000037510	51.2712	40.2542
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45	28.4615	dipodomys_ordii	ENSDORP00000021895	54.9296	34.7418
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	40.7692	29.6154	taeniopygia_guttata	ENSTGUP00000013509	47.3214	34.375
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	37.6923	27.3077	ictidomys_tridecemlineatus	ENSSTOP00000016053	56	40.5714
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	35.7692	phocoena_sinus	ENSPSNP00000014194	51.0638	39.5745
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	34.2308	pongo_abelii	ENSPPYP00000004820	51.2712	37.7119
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.4615	35.7692	callithrix_jacchus	ENSCJAP00000009868	50.8064	37.5
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	34.2308	rhinopithecus_bieti	ENSRBIP00000014131	50.8475	37.7119
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	33.4615	ovis_aries_rambouillet	ENSOARP00020010951	52.8384	37.9913
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.9231	34.2308	catagonus_wagneri	ENSCWAP00000009227	51.6949	37.7119
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.7692	33.4615	bison_bison_bison	ENSBBBP00000007785	50.4237	36.8644
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	42.6923	30	serinus_canaria	ENSSCAP00000021247	57.2165	40.2062
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.3846	36.1538	mus_spicilegus	ENSMSIP00000034717	47.7733	38.0567
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	34.2308	rhinopithecus_roxellana	ENSRROP00000019101	50.8475	37.7119
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.6923	34.6154	ursus_maritimus	ENSUMAP00000022639	50.8197	36.8852
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	39.6154	30	geospiza_fortis	ENSGFOP00000016140	43.0962	32.636
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	49.2308	36.1538	monodelphis_domestica	ENSMODP00000022453	54.4681	40
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45.7692	33.4615	bos_mutus	ENSBMUP00000007649	50.4237	36.8644
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.4615	34.6154	prolemur_simus	ENSPSMP00000007054	52.0661	37.1901
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.0769	35	ursus_americanus	ENSUAMP00000014502	51.2295	37.2951
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	6.53846	3.07692	mus_caroli	MGP_CAROLIEiJ_P0075904	9.55056	4.49438
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	33.8462	nannospalax_galili	ENSNGAP00000024301	52.4017	38.4279
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.9231	33.0769	cervus_hanglu_yarkandensis	ENSCHYP00000027338	50.4132	35.5372
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	38.8462	26.1538	salvator_merianae	ENSSMRP00000005650	52.8796	35.6021
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	38.8462	27.3077	salvator_merianae	ENSSMRP00000005670	59.4118	41.7647
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	34.6154	jaculus_jaculus	ENSJJAP00000021885	52.8384	39.3013
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	35	canis_lupus_dingo	ENSCAFP00020004249	50.6276	38.0753
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.8462	36.5385	panthera_tigris_altaica	ENSPTIP00000024049	53.8136	40.2542
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.6923	37.6923	terrapene_carolina_triunguis	ENSTMTP00000022250	63.2653	50
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.9231	33.8462	propithecus_coquereli	ENSPCOP00000005850	53.9823	38.9381
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	22.6923	15.3846	octodon_degus	ENSODEP00000001474	60.2041	40.8163
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	31.1538	23.8462	carlito_syrichta	ENSTSYP00000026327	57.4468	43.9716
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.3077	34.6154	microcebus_murinus	ENSMICP00000050270	52.1186	38.1356
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	40	30.3846	aquila_chrysaetos_chrysaetos	ENSACCP00020024680	45.815	34.8018
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	40.3846	26.5385	podarcis_muralis	ENSPMRP00000034375	56.4516	37.0968
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	40.3846	26.9231	podarcis_muralis	ENSPMRP00000034386	48.1651	32.1101
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.3077	34.6154	camelus_dromedarius	ENSCDRP00005031281	52.1186	38.1356
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.9231	34.2308	capra_hircus	ENSCHIP00000008849	50.6224	36.9295
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.9231	35.3846	rhinolophus_ferrumequinum	ENSRFEP00010006586	51.6949	38.9831
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	38.0769	27.3077	ficedula_albicollis	ENSFALP00000017685	51.8325	37.1728
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	45	35	rattus_norvegicus	ENSRNOP00000094681	39.1304	30.4348
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.6923	34.2308	neovison_vison	ENSNVIP00000010637	52.5424	37.7119
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.6923	35.7692	cebus_imitator	ENSCCAP00000009013	52.5424	39.4068
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	47.3077	35.7692	vulpes_vulpes	ENSVVUP00000014374	52.1186	39.4068
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.0769	35	echinops_telfairi	ENSETEP00000003973	52.9661	38.5593
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	26.9231	19.6154	anser_brachyrhynchus	ENSABRP00000015442	50.7246	36.9565
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.5385	35.3846	aotus_nancymaae	ENSANAP00000019931	48.7903	37.0968
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	49.6154	35	phascolarctos_cinereus	ENSPCIP00000032289	54.661	38.5593
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	34.6154	26.1538	strigops_habroptila	ENSSHBP00005022499	56.962	43.038
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	48.8462	36.5385	panthera_leo	ENSPLOP00000006121	53.8136	40.2542
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.1538	33.0769	moschus_moschiferus	ENSMMSP00000030779	50.8475	36.4407
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	46.9231	36.1538	peromyscus_maniculatus_bairdii	ENSPEMP00000028263	53.2751	41.048
ENSSPUG00000009044	sphenodon_punctatus	ENSSPUP00000011780	44.6154	35.7692	gopherus_evgoodei	ENSGEVP00005001524	49.5727	39.7436

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression