Description

Ensembl ID ENSSPUG00000001533 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 29615 bases Strand Minus strand
Position QEPC01012438.1 : 609061 - 638675 RNA binding domain MMR_HSR1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSPUP00000002021 MMR_HSR1 PF01926 4.6e-05 1
ENSSPUP00000002029 MMR_HSR1 PF01926 0.0001 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSPUT00000002137 636 211aa ENSSPUP00000002021
- ENSSPUT00000002145 636 211aa ENSSPUP00000002029

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001215037.722424.1993sphenodon_punctatusENSSPUP0000000202150.23732.2275
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000004051.546432.9897sphenodon_punctatusENSSPUP0000000202147.393430.3318
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001945854.106335.2657sphenodon_punctatusENSSPUP0000000202153.080634.5972
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000123547.979831.3131sphenodon_punctatusENSSPUP0000000202145.023729.3839
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002435848.584931.6038sphenodon_punctatusENSSPUP0000000202148.815231.7536
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000079952.358532.0755sphenodon_punctatusENSSPUP0000000202152.606632.2275
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000052247.533629.5964sphenodon_punctatusENSSPUP0000000202150.23731.2796
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001686151.141631.0502sphenodon_punctatusENSSPUP0000000202153.080632.2275
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000521050.697727.907sphenodon_punctatusENSSPUP0000000202151.658828.436
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000556250.970932.0388sphenodon_punctatusENSSPUP0000000202149.76331.2796
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001413954.90232.3529sphenodon_punctatusENSSPUP0000000202153.080631.2796
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002339553.456235.4839sphenodon_punctatusENSSPUP0000000202154.976336.4929
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002006645.833325.463sphenodon_punctatusENSSPUP0000000202146.919426.0664
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000817251.724134.4828sphenodon_punctatusENSSPUP0000000202149.76333.1754
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000607249.756133.1707sphenodon_punctatusENSSPUP0000000202148.341232.2275
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001695038.818625.3165sphenodon_punctatusENSSPUP0000000202143.601928.436
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000848742.038224.8408sphenodon_punctatusENSSPUP0000000202131.279618.4834
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001544451.219531.7073sphenodon_punctatusENSSPUP0000000202139.810424.6446
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001303951.528432.7511sphenodon_punctatusENSSPUP0000000202155.924235.545
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001051044.444428.2051sphenodon_punctatusENSSPUP0000000202149.289131.2796
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001344948.598130.8411sphenodon_punctatusENSSPUP0000000202149.289131.2796
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001772854.187230.0493sphenodon_punctatusENSSPUP0000000202152.132728.91
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001635935.81421.8605sphenodon_punctatusENSSPUP0000000202136.492922.2749
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000698939.914224.0343sphenodon_punctatusENSSPUP0000000202144.075826.5403
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002338849.541330.2752sphenodon_punctatusENSSPUP0000000202151.184831.2796
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000810638.396624.8945sphenodon_punctatusENSSPUP0000000202143.12827.9621
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000719344.104828.821sphenodon_punctatusENSSPUP0000000202147.867331.2796
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000342448.416329.4118sphenodon_punctatusENSSPUP0000000202150.710930.8057
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001993956.038637.1981sphenodon_punctatusENSSPUP0000000202154.976336.4929
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000559553.921633.8235sphenodon_punctatusENSSPUP0000000202152.132732.7014
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000039545.555630sphenodon_punctatusENSSPUP0000000202119.431312.7962
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000225351.598231.5068sphenodon_punctatusENSSPUP0000000202153.554532.7014
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001312452.534632.7189sphenodon_punctatusENSSPUP0000000202154.028433.6493
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001200051.442332.6923sphenodon_punctatusENSSPUP0000000202150.710932.2275
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001504850.717731.5789sphenodon_punctatusENSSPUP0000000202150.23731.2796
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002383947.058829.4118sphenodon_punctatusENSSPUP0000000202145.497628.436
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000416240.650426.8293sphenodon_punctatusENSSPUP0000000202147.393431.2796
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001451646.698129.2453sphenodon_punctatusENSSPUP0000000202146.919429.3839
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002303253.883534.466sphenodon_punctatusENSSPUP0000000202152.606633.6493
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001946041.12927.4194sphenodon_punctatusENSSPUP0000000202124.170616.1137
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001898739.622625.6604sphenodon_punctatusENSSPUP0000000202149.76332.2275
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001674753.703736.1111sphenodon_punctatusENSSPUP0000000202154.976336.9668
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000448048.756231.8408sphenodon_punctatusENSSPUP0000000202146.445530.3318
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001755349.751232.3383sphenodon_punctatusENSSPUP0000000202147.393430.8057
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001310643.220324.5763sphenodon_punctatusENSSPUP0000000202124.170613.7441
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001525840.084424.4726sphenodon_punctatusENSSPUP0000000202145.023727.4882
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000063452.582231.9249sphenodon_punctatusENSSPUP0000000202153.080632.2275
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002284147.761230.8458sphenodon_punctatusENSSPUP0000000202145.497629.3839
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000380915.38469.5791sphenodon_punctatusENSSPUP0000000202150.23731.2796
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002244051.851932.4074sphenodon_punctatusENSSPUP0000000202153.080633.1754
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002454649.122828.5088sphenodon_punctatusENSSPUP0000000202153.080630.8057
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000768747.290631.0345sphenodon_punctatusENSSPUP0000000202145.497629.8578
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002112355.223932.3383sphenodon_punctatusENSSPUP0000000202152.606630.8057
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002326355.147130.1471sphenodon_punctatusENSSPUP0000000202135.54519.4313
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000150054.639237.1134sphenodon_punctatusENSSPUP0000000202150.23734.1232
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001657153.170734.1463sphenodon_punctatusENSSPUP0000000202151.658833.1754
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001520250.697731.6279sphenodon_punctatusENSSPUP0000000202151.658832.2275
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000445452.307735.3846sphenodon_punctatusENSSPUP0000000202148.341232.7014
ENSSPUG00000001533sphenodon_punctatusENSSPUP000000050225538sphenodon_punctatusENSSPUP0000000202152.132736.019
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001343653.27133.1776sphenodon_punctatusENSSPUP0000000202154.028433.6493
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000288352.752329.3578sphenodon_punctatusENSSPUP0000000202154.502430.3318
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001947648.529430.3922sphenodon_punctatusENSSPUP0000000202146.919429.3839
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001026853.731334.3284sphenodon_punctatusENSSPUP0000000202151.184832.7014
ENSSPUG00000001533sphenodon_punctatusENSSPUP000000128105435.5sphenodon_punctatusENSSPUP0000000202151.184833.6493
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000246146.511629.3023sphenodon_punctatusENSSPUP0000000202147.393429.8578
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000330552.534626.2673sphenodon_punctatusENSSPUP0000000202154.028427.0142
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000001931351.162834.8837sphenodon_punctatusENSSPUP0000000202152.132735.545
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000002252696.634690.3846sphenodon_punctatusENSSPUP0000000202195.260789.0995

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202184.834173.9336caenorhabditis_elegansF59B2.7.187.317176.0976
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202190.995382.4645ciona_intestinalisENSCINP0000000604191.86683.2536
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202193.838984.8341eptatretus_burgeriENSEBUP0000001144495.192386.0577
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202196.208592.891callorhinchus_miliiENSCMIP0000002496295.754792.4528
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202197.630394.3128latimeria_chalumnaeENSLACP0000001587597.630394.3128
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202195.260791.9431lepisosteus_oculatusENSLOCP0000001869195.260791.9431
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202190.521384.8341clupea_harengusENSCHAP0000004570783.771978.5088
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.312891.9431danio_rerioENSDARP0000006954194.312891.9431
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202146.919444.0758carassius_auratusENSCARP0000001328685.344880.1724
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202190.047484.8341carassius_auratusENSCARP0000001348075.098870.751
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202186.729982.4645astyanax_mexicanusENSAMXP0000004099993.367388.7755
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202195.260792.4171electrophorus_electricusENSEEEP0000003008295.260792.4171
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202195.260792.891ictalurus_punctatusENSIPUP0000002866595.260792.891
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202178.67371.09esox_luciusENSELUP0000005635050.609845.7317
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202173.933665.8768oncorhynchus_kisutchENSOKIP0000504242971.889464.0553
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.786790.9953oncorhynchus_kisutchENSOKIP0000503778394.339690.566
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.786792.891oncorhynchus_mykissENSOMYP0000009770294.786792.891
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.312891.9431salmo_salarENSSSAP0000009415594.312891.9431
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.786792.891salmo_truttaENSSTUP0000004281794.786792.891
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202193.838990.5213salmo_truttaENSSTUP0000007425586.462983.4061
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202193.838990.0474gadus_morhuaENSGMOP0000006697393.396289.6226
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202171.56465.8768oryzias_latipesENSORLP0000003479139.528836.3874
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202179.620876.3033cyclopterus_lumpusENSCLMP0000504415379.620876.3033
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.312892.4171astatotilapia_callipteraENSACLP0000002862594.312892.4171
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.312892.4171sparus_aurataENSSAUP0001001568194.312892.4171
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202189.099581.5166xenopus_tropicalisENSXETP0000005880487.03779.6296
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202184.360279.6208crocodylus_porosusENSCPRP0000501290873.25169.1358
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202172.037965.8768meleagris_gallopavoENSMGAP0000000091860.317555.1587
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202190.995382.4645ciona_savignyiENSCSAVP0000001554491.86683.2536
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202198.104394.7867chelonoidis_abingdoniiENSCABP0000001131998.104394.7867
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202198.104392.4171anolis_carolinensisENSACAP0000002738196.279190.6977
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202134.123229.3839sarcophilus_harrisiiENSSHAP000000062949077.5
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202192.417190.0474scophthalmus_maximusENSSMAP000000640407573.0769
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202157.34649.763acanthochromis_polyacanthusENSAPOP0000000408955.760448.3871
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202193.364990.9953hippocampus_comesENSHCOP0000000311593.364990.9953
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202185.78277.2512taeniopygia_guttataENSTGUP0000002636673.577266.2602
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.312892.4171betta_splendensENSBSLP0000002238180.894379.2683
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202188.625685.782sander_luciopercaENSSLUP0000005718483.111180.4444
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.312891.9431oryzias_javanicusENSOJAP0000000596677.431975.4864
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202190.047485.782stegastes_partitusENSSPAP0000000788879.166775.4167
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202182.464577.2512nothobranchius_furzeriENSNFUP0001500395977.333372.4444
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.312892.4171pundamilia_nyerereiENSPNYP0000001755394.312892.4171
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202195.260792.4171pygocentrus_nattereriENSPNAP0000001561495.260792.4171
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202199.526199.5261terrapene_carolina_triunguisENSTMTP0000000184499.526199.5261
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202176.303369.1943paramormyrops_kingsleyaeENSPKIP0000001157576.303369.1943
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202190.521383.8863scleropages_formosusENSSFOP0001504371689.671483.0986
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202198.104391.9431podarcis_muralisENSPMRP0000003109797.641591.5094
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.312892.4171seriola_lalandi_dorsalisENSSLDP0000002884694.312892.4171
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202193.838990.5213sinocyclocheilus_grahamiENSSGRP0000005539490.825787.6147
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202177.725171.09denticeps_clupeoidesENSDCDP0000003421971.615765.5022
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202193.838991.4692poecilia_latipinnaENSPLAP0000001308493.838991.4692
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202192.89189.5735mastacembelus_armatusENSMAMP0000006707073.684271.0526
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202193.838991.9431cyprinodon_variegatusENSCVAP0000000068493.838991.9431
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.312892.4171gasterosteus_aculeatusENSGACP0000002266994.312892.4171
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202193.838991.4692neolamprologus_brichardiENSNBRP0000002983093.838991.4692
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202193.364990.9953cynoglossus_semilaevisENSCSEP0000000766893.364990.9953
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202194.786790.9953oncorhynchus_tshawytschaENSOTSP0000501146094.339690.566
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202188.151785.782oncorhynchus_tshawytschaENSOTSP0000500703587.735885.3774
ENSSPUG00000001533sphenodon_punctatusENSSPUP0000000202198.578295.2607gopherus_evgoodeiENSGEVP0000501343798.578295.2607

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression