RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSPAG00000020927	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1055 bases	Strand	Plus strand
Position	KK580619.1 : 3261 - 4315	RNA binding domain	MBD
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSPAP00000027748	MBD	PF01429	5.1e-13	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSPAT00000028201	945	314aa	ENSSPAP00000027748

Gene Model

Click here to download ENSSPAG00000020927's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSPAG00000020927's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSPAG00000020927

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSPAG00000020927	stegastes_partitus	ENSSPAP00000027748	45.8599	23.8854	erpetoichthys_calabaricus	ENSECRP00000021951	43.769	22.7964

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression