Description

Ensembl ID ENSSORG00005001953 Gene ID 115428294 Accession -
Symbol Alias - Full Name polyadenylate-binding protein 1-like
Status Confidence Length 31207 bases Strand Minus strand
Position 11 : 1786833 - 1818039 RNA binding domain PABP , RRM_5 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSORP00005009798 PABP PF00658 8.5e-31 1
ENSSORP00005009798 RRM_5 PF13893 2.4e-07 2
ENSSORP00005009798 RRM_5 PF13893 2.4e-07 3
ENSSORP00005009798 RRM_1 PF00076 2.3e-80 4
ENSSORP00005009798 RRM_1 PF00076 2.3e-80 5
ENSSORP00005009798 RRM_1 PF00076 2.3e-80 6
ENSSORP00005009798 RRM_1 PF00076 2.3e-80 7
ENSSORP00005009471 PABP PF00658 1.2e-30 1
ENSSORP00005009471 RRM_5 PF13893 4.5e-07 2
ENSSORP00005009471 RRM_5 PF13893 4.5e-07 3
ENSSORP00005009471 RRM_1 PF00076 3.4e-80 4
ENSSORP00005009471 RRM_1 PF00076 3.4e-80 5
ENSSORP00005009471 RRM_1 PF00076 3.4e-80 6
ENSSORP00005009471 RRM_1 PF00076 3.4e-80 7
ENSSORP00005009544 PABP PF00658 1.2e-30 1
ENSSORP00005009544 RRM_5 PF13893 4.9e-06 2
ENSSORP00005009544 RRM_5 PF13893 4.9e-06 3
ENSSORP00005009544 RRM_1 PF00076 2e-70 4
ENSSORP00005009544 RRM_1 PF00076 2e-70 5
ENSSORP00005009544 RRM_1 PF00076 2e-70 6
ENSSORP00005009544 RRM_1 PF00076 2e-70 7
ENSSORP00005008913 PABP PF00658 1.3e-30 1
ENSSORP00005008913 RRM_5 PF13893 5.1e-07 2
ENSSORP00005008913 RRM_5 PF13893 5.1e-07 3
ENSSORP00005008913 RRM_1 PF00076 4.2e-82 4
ENSSORP00005008913 RRM_1 PF00076 4.2e-82 5
ENSSORP00005008913 RRM_1 PF00076 4.2e-82 6
ENSSORP00005008913 RRM_1 PF00076 4.2e-82 7
ENSSORP00005008657 PABP PF00658 1.3e-30 1
ENSSORP00005008657 RRM_5 PF13893 7.1e-08 2
ENSSORP00005008657 RRM_5 PF13893 7.1e-08 3
ENSSORP00005008657 RRM_1 PF00076 2.5e-83 4
ENSSORP00005008657 RRM_1 PF00076 2.5e-83 5
ENSSORP00005008657 RRM_1 PF00076 2.5e-83 6
ENSSORP00005008657 RRM_1 PF00076 2.5e-83 7
ENSSORP00005009442 PABP PF00658 1.3e-30 1
ENSSORP00005009442 RRM_5 PF13893 4.7e-07 2
ENSSORP00005009442 RRM_5 PF13893 4.7e-07 3
ENSSORP00005009442 RRM_1 PF00076 4e-80 4
ENSSORP00005009442 RRM_1 PF00076 4e-80 5
ENSSORP00005009442 RRM_1 PF00076 4e-80 6
ENSSORP00005009442 RRM_1 PF00076 4e-80 7
ENSSORP00005009714 PABP PF00658 5.8e-22 1
ENSSORP00005009714 RRM_5 PF13893 4.1e-07 2
ENSSORP00005009714 RRM_5 PF13893 4.1e-07 3
ENSSORP00005009714 RRM_1 PF00076 3.1e-80 4
ENSSORP00005009714 RRM_1 PF00076 3.1e-80 5
ENSSORP00005009714 RRM_1 PF00076 3.1e-80 6
ENSSORP00005009714 RRM_1 PF00076 3.1e-80 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSORT00005008957 2700 609aa ENSSORP00005008657
- ENSSORT00005009215 2146 621aa ENSSORP00005008913
- ENSSORT00005009760 2119 612aa ENSSORP00005009442
- ENSSORT00005009790 2071 596aa ENSSORP00005009471
- ENSSORT00005009863 2044 587aa ENSSORP00005009544
- ENSSORT00005010040 2035 584aa ENSSORP00005009714
- ENSSORT00005010125 1843 520aa ENSSORP00005009798

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSORG00005001953

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSORG00005001953

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression