Description

Ensembl ID ENSSORG00005001171 Gene ID 115435355 Accession -
Symbol Alias - Full Name polyadenylate-binding protein 1-like
Status Confidence Length 6079 bases Strand Plus strand
Position 16 : 6260009 - 6266087 RNA binding domain PABP , RRM_5 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSORP00005001984 PABP PF00658 1.3e-30 1
ENSSORP00005001984 RRM_5 PF13893 2e-07 2
ENSSORP00005001984 RRM_1 PF00076 3.5e-92 3
ENSSORP00005001984 RRM_1 PF00076 3.5e-92 4
ENSSORP00005001984 RRM_1 PF00076 3.5e-92 5
ENSSORP00005001984 RRM_1 PF00076 3.5e-92 6
ENSSORP00005002002 PABP PF00658 1.5e-30 1
ENSSORP00005002002 RRM_1 PF00076 8.3e-61 2
ENSSORP00005002002 RRM_1 PF00076 8.3e-61 3
ENSSORP00005002002 RRM_1 PF00076 8.3e-61 4
ENSSORP00005001982 PABP PF00658 1.7e-30 1
ENSSORP00005001982 RRM_5 PF13893 4.4e-07 2
ENSSORP00005001982 RRM_1 PF00076 8.3e-92 3
ENSSORP00005001982 RRM_1 PF00076 8.3e-92 4
ENSSORP00005001982 RRM_1 PF00076 8.3e-92 5
ENSSORP00005001982 RRM_1 PF00076 8.3e-92 6
ENSSORP00005001980 PABP PF00658 1.9e-30 1
ENSSORP00005001980 RRM_1 PF00076 1.3e-86 2
ENSSORP00005001980 RRM_1 PF00076 1.3e-86 3
ENSSORP00005001980 RRM_1 PF00076 1.3e-86 4
ENSSORP00005001980 RRM_1 PF00076 1.3e-86 5
ENSSORP00005002000 RRM_5 PF13893 5.6e-08 1
ENSSORP00005002000 RRM_5 PF13893 5.6e-08 2
ENSSORP00005002000 RRM_1 PF00076 9.2e-93 3
ENSSORP00005002000 RRM_1 PF00076 9.2e-93 4
ENSSORP00005002000 RRM_1 PF00076 9.2e-93 5
ENSSORP00005002000 RRM_1 PF00076 9.2e-93 6
ENSSORP00005001985 RRM_5 PF13893 7.6e-08 1
ENSSORP00005001985 RRM_5 PF13893 7.6e-08 2
ENSSORP00005001985 RRM_1 PF00076 5.1e-93 3
ENSSORP00005001985 RRM_1 PF00076 5.1e-93 4
ENSSORP00005001985 RRM_1 PF00076 5.1e-93 5
ENSSORP00005001985 RRM_1 PF00076 5.1e-93 6

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSORT00005002036 3059 664aa ENSSORP00005001980
- ENSSORT00005002038 2972 635aa ENSSORP00005001982
- ENSSORT00005002040 2693 542aa ENSSORP00005001984
- ENSSORT00005002041 1842 385aa ENSSORP00005001985
- ENSSORT00005002056 1275 424aa ENSSORP00005002000
- ENSSORT00005002058 2093 570aa ENSSORP00005002002

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSORG00005001171

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSORG00005001171

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression