Description

Ensembl ID ENSSOCG00000010589 Gene ID Accession -
Symbol Alias - Full Name tRNA splicing endonuclease subunit 54
Status Confidence Length 9976 bases Strand Plus strand
Position NIFN01000366.1 : 4006464 - 4016439 RNA binding domain tRNA_int_end_N2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSOCP00000014265 tRNA_int_end_N2 PF12928 6.7e-19 1
ENSSOCP00000014257 tRNA_int_end_N2 PF12928 6.9e-19 1
ENSSOCP00000014235 tRNA_int_end_N2 PF12928 7.5e-19 1
ENSSOCP00000014292 tRNA_int_end_N2 PF12928 3.5e-16 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSOCT00000014611 1500 499aa ENSSOCP00000014235
- ENSSOCT00000014633 1581 526aa ENSSOCP00000014257
- ENSSOCT00000014641 1572 523aa ENSSOCP00000014265
- ENSSOCT00000014668 501 166aa ENSSOCP00000014292

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSOCG00000010589

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSOCG00000010589

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression