Description

Ensembl ID ENSSOCG00000006329 Gene ID Accession -
Symbol Alias - Full Name SMG5 nonsense mediated mRNA decay factor
Status Confidence Length 22481 bases Strand Plus strand
Position NIFN01000641.1 : 209494 - 231974 RNA binding domain EST1 , PIN_4 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSOCP00000008385 EST1 PF10374 7e-22 1
ENSSOCP00000008385 PIN_4 PF13638 1.4e-06 2
ENSSOCP00000008385 EST1_DNA_bind PF10373 2.4e-39 3
ENSSOCP00000008385 EST1_DNA_bind PF10373 2.4e-39 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSOCT00000008599 3057 1018aa ENSSOCP00000008385

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSOCG00000006329

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSOCG00000006329

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression