Description

Ensembl ID ENSSOCG00000001711 Gene ID Accession -
Symbol Alias - Full Name UPF1 RNA helicase and ATPase
Status Confidence Length 14148 bases Strand Plus strand
Position NIFN01000003.1 : 1572628 - 1586775 RNA binding domain ResIII , UPF1_1B_dom , UPF1_Zn_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSOCP00000002229 ResIII PF04851 1.8e-05 1
ENSSOCP00000002229 UPF1_1B_dom PF18141 8.9e-33 2
ENSSOCP00000002229 UPF1_Zn_bind PF09416 1.5e-77 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSSOCT00000002280 3129 1042aa ENSSOCP00000002229

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSOCG00000001711

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSOCG00000001711

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression