Description

Ensembl ID ENSSMAG00000012345 Gene ID Accession -
Symbol ifih1 Alias - Full Name interferon induced with helicase C domain 1
Status Confidence Length 10306 bases Strand Minus strand
Position 14 : 11902300 - 11912605 RNA binding domain ResIII , DEAD , RIG-I_C , RIG-I_C-RD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSSMAP00000020246 ResIII PF04851 1.6e-18 1
ENSSMAP00000020246 DEAD PF00270 7.4e-17 2
ENSSMAP00000020246 RIG-I_C PF18119 2e-12 3
ENSSMAP00000020246 RIG-I_C-RD PF11648 7.7e-34 4
ENSSMAP00000070141 ResIII PF04851 1.7e-17 1
ENSSMAP00000070141 DEAD PF00270 7.1e-17 2
ENSSMAP00000070141 RIG-I_C PF18119 1.3e-33 3
ENSSMAP00000070141 RIG-I_C-RD PF11648 7.8e-34 4
ENSSMAP00000062853 ResIII PF04851 1.7e-17 1
ENSSMAP00000062853 DEAD PF00270 7.6e-17 2
ENSSMAP00000062853 RIG-I_C PF18119 6.1e-36 3
ENSSMAP00000062853 RIG-I_C-RD PF11648 8.1e-34 4
ENSSMAP00000064571 ResIII PF04851 1.8e-17 1
ENSSMAP00000064571 DEAD PF00270 7.8e-17 2
ENSSMAP00000064571 RIG-I_C PF18119 6.2e-36 3
ENSSMAP00000064571 RIG-I_C-RD PF11648 8.2e-34 4
ENSSMAP00000064431 ResIII PF04851 1.8e-17 1
ENSSMAP00000064431 DEAD PF00270 7.7e-17 2
ENSSMAP00000064431 RIG-I_C PF18119 6.2e-36 3
ENSSMAP00000064431 RIG-I_C-RD PF11648 8.2e-34 4
ENSSMAP00000020200 ResIII PF04851 1.8e-17 1
ENSSMAP00000020200 DEAD PF00270 8.3e-17 2
ENSSMAP00000020200 RIG-I_C PF18119 6.4e-36 3
ENSSMAP00000020200 RIG-I_C-RD PF11648 8.5e-34 4
ENSSMAP00000067430 ResIII PF04851 1.8e-17 1
ENSSMAP00000067430 DEAD PF00270 8.3e-17 2
ENSSMAP00000067430 RIG-I_C PF18119 6.4e-36 3
ENSSMAP00000067430 RIG-I_C-RD PF11648 8.5e-34 4
ENSSMAP00000020281 ResIII PF04851 1.9e-17 1
ENSSMAP00000020281 DEAD PF00270 8.5e-17 2
ENSSMAP00000020281 RIG-I_C PF18119 6.5e-36 3
ENSSMAP00000020281 RIG-I_C-RD PF11648 8.6e-34 4
ENSSMAP00000020234 ResIII PF04851 1.9e-17 1
ENSSMAP00000020234 DEAD PF00270 8.6e-17 2
ENSSMAP00000020234 RIG-I_C PF18119 6.6e-36 3
ENSSMAP00000020234 RIG-I_C-RD PF11648 8.7e-34 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
ifih1-201 ENSSMAT00000045279 3181 954aa ENSSMAP00000062853
ifih1-202 ENSSMAT00000020480 3325 1002aa ENSSMAP00000020234
ifih1-203 ENSSMAT00000020529 3304 995aa ENSSMAP00000020281
ifih1-204 ENSSMAT00000020447 3277 986aa ENSSMAP00000020200
ifih1-205 ENSSMAT00000068189 3277 986aa ENSSMAP00000067430
ifih1-206 ENSSMAT00000082714 3208 963aa ENSSMAP00000064431
ifih1-207 ENSSMAT00000050800 3202 961aa ENSSMAP00000064571
ifih1-208 ENSSMAT00000040004 3103 928aa ENSSMAP00000070141
ifih1-209 ENSSMAT00000020493 3088 923aa ENSSMAP00000020246

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSMAG00000012345

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSSMAG00000012345

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression