| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSSLUG00000014465 | Gene ID |
116062980 |
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
uncharacterized LOC116062980 |
| Status |
Confidence |
Length |
2107 bases |
Strand |
Plus strand |
| Position |
VTTG01000033.1 : 2380633 - 2382739 |
RNA binding domain |
PABP |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSSLUP00000032419 |
PABP |
PF00658 |
7.7e-45 |
1 |
| ENSSLUP00000032419 |
PABP |
PF00658 |
7.7e-45 |
2 |
| ENSSLUP00000032419 |
PABP |
PF00658 |
7.7e-45 |
3 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSSLUT00000033442 |
1047 |
221aa |
ENSSLUP00000032419 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSLUG00000014465 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 85.0679 | 72.8507 | fundulus_heteroclitus | ENSFHEP00000006678 | 87.037 | 74.537 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 84.6154 | 74.6606 | xiphophorus_maculatus | ENSXMAP00000022074 | 86.5741 | 76.3889 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 91.4027 | 87.3303 | cyclopterus_lumpus | ENSCLMP00005042006 | 88.2096 | 84.2795 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 79.638 | 70.1357 | poecilia_reticulata | ENSPREP00000002738 | 86.6995 | 76.3547 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 87.3303 | 77.3756 | oreochromis_niloticus | ENSONIP00000029092 | 89.7674 | 79.5349 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 84.1629 | 73.7557 | haplochromis_burtoni | ENSHBUP00000025414 | 54.0698 | 47.3837 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 86.4253 | 76.4706 | astatotilapia_calliptera | ENSACLP00000041475 | 88.8372 | 78.6047 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 86.4253 | 77.8281 | sparus_aurata | ENSSAUP00010050451 | 84.141 | 75.7709 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 90.9502 | 84.6154 | lates_calcarifer | ENSLCAP00010004525 | 94.3662 | 87.7934 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 77.3756 | 67.8733 | takifugu_rubripes | ENSTRUP00000061340 | 75.6637 | 66.3717 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 85.0679 | 73.3032 | cyprinodon_variegatus | ENSCVAP00000019141 | 87.037 | 75 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 84.6154 | 74.6606 | poecilia_formosa | ENSPFOP00000026315 | 86.9767 | 76.7442 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 92.7602 | 87.3303 | dicentrarchus_labrax | ENSDLAP00005068825 | 95.7944 | 90.1869 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 82.8054 | 76.0181 | kryptolebias_marmoratus | ENSKMAP00000015227 | 86.3208 | 79.2453 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 86.4253 | 75.5656 | poecilia_latipinna | ENSPLAP00000020349 | 88.4259 | 77.3148 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 88.6878 | 79.638 | anabas_testudineus | ENSATEP00000019824 | 91.1628 | 81.8605 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 89.5928 | 80.0905 | acanthochromis_polyacanthus | ENSAPOP00000034558 | 92.5234 | 82.7103 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 82.3529 | 68.7783 | tetraodon_nigroviridis | ENSTNIP00000005128 | 84.2593 | 70.3704 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 71.9457 | 64.2534 | neolamprologus_brichardi | ENSNBRP00000008616 | 68.8312 | 61.4719 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 89.1403 | 80.543 | amphiprion_ocellaris | ENSAOCP00000015162 | 92.0561 | 83.1776 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 87.3303 | 75.1131 | betta_splendens | ENSBSLP00000032681 | 89.3519 | 76.8519 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 72.8507 | 63.8009 | nothobranchius_furzeri | ENSNFUP00015007374 | 87.027 | 76.2162 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 90.9502 | 82.8054 | seriola_lalandi_dorsalis | ENSSLDP00000000413 | 93.4884 | 85.1163 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 72.3982 | 62.8959 | cynoglossus_semilaevis | ENSCSEP00000001942 | 86.0215 | 74.7312 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 80.0905 | 73.3032 | larimichthys_crocea | ENSLCRP00005052905 | 87.1921 | 79.803 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 89.5928 | 82.8054 | mastacembelus_armatus | ENSMAMP00000026249 | 92.5234 | 85.514 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 89.5928 | 80.543 | amphiprion_percula | ENSAPEP00000029514 | 92.5234 | 83.1776 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 90.0452 | 81.448 | stegastes_partitus | ENSSPAP00000020075 | 92.9907 | 84.1122 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 67.8733 | 60.181 | pundamilia_nyererei | ENSPNYP00000006161 | 81.0811 | 71.8919 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 91.4027 | 83.2579 | seriola_dumerili | ENSSDUP00000020751 | 93.9535 | 85.5814 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 89.5928 | 83.2579 | labrus_bergylta | ENSLBEP00000037305 | 88.3929 | 82.1429 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 55.2036 | 38.009 | callorhinchus_milii | ENSCMIP00000033430 | 46.2121 | 31.8182 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 52.9412 | 41.1765 | lepisosteus_oculatus | ENSLOCP00000003630 | 73.125 | 56.875 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 77.3756 | 65.6109 | esox_lucius | ENSELUP00000000105 | 64.5283 | 54.717 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 84.1629 | 71.0407 | oncorhynchus_kisutch | ENSOKIP00005104778 | 82.3009 | 69.469 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 83.7104 | 70.1357 | oncorhynchus_mykiss | ENSOMYP00000083163 | 81.1404 | 67.9825 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 60.181 | 48.4163 | salmo_salar | ENSSSAP00000025921 | 74.3017 | 59.7765 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 83.7104 | 71.0407 | salmo_trutta | ENSSTUP00000099795 | 81.1404 | 68.8596 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 76.0181 | 64.2534 | gadus_morhua | ENSGMOP00000031099 | 60.2151 | 50.8961 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 64.7059 | 49.7738 | erpetoichthys_calabaricus | ENSECRP00000017933 | 48.6395 | 37.415 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 83.7104 | 71.0407 | hucho_hucho | ENSHHUP00000070473 | 82.2222 | 69.7778 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 83.7104 | 71.0407 | oncorhynchus_tshawytscha | ENSOTSP00005048319 | 81.1404 | 68.8596 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 73.7557 | 59.7285 | scleropages_formosus | ENSSFOP00015001953 | 73.4234 | 59.4595 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 73.3032 | 56.5611 | paramormyrops_kingsleyae | ENSPKIP00000020579 | 71.3656 | 55.0661 |
| ENSSLUG00000014465 | sander_lucioperca | ENSSLUP00000032419 | 87.3303 | 80.0905 | myripristis_murdjan | ENSMMDP00005002226 | 90.1869 | 82.7103 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
