RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSSGRG00000009612	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	1286 bases	Strand	Minus strand
Position	LCYQ01S002110.1 : 70585 - 71870	RNA binding domain	RnaseA
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSSGRP00000015442	RnaseA	PF00074	1.5e-05	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSSGRT00000016727	477	158aa	ENSSGRP00000015442

Gene Model

Click here to download ENSSGRG00000009612's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSSGRG00000009612's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSGRG00000009612	sinocyclocheilus_grahami	ENSSGRP00000008876	97.4684	97.4684	sinocyclocheilus_grahami	ENSSGRP00000015442	97.4684	97.4684
ENSSGRG00000009612	sinocyclocheilus_grahami	ENSSGRP00000007480	66.4557	48.1013	sinocyclocheilus_grahami	ENSSGRP00000015442	66.4557	48.1013

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSSGRG00000009612	sinocyclocheilus_grahami	ENSSGRP00000015442	61.3924	52.5316	carassius_auratus	ENSCARP00000029086	75.7812	64.8438
ENSSGRG00000009612	sinocyclocheilus_grahami	ENSSGRP00000015442	56.962	44.9367	cyprinus_carpio_carpio	ENSCCRP00000003520	67.1642	52.9851

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression